RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ATP5LO75964 103 aa18.21■□□□□ 0.5
CTSA-203ENST00000372459 VAMP3Q15836 100 aa18.21■□□□□ 0.5
CTSA-203ENST00000372459 C11orf72Q8NBR9 251 aa18.21■□□□□ 0.5
CTSA-203ENST00000372459 TMEM97Q5BJF2 176 aa18.2■□□□□ 0.5
CTSA-203ENST00000372459 SPXQ9BT56 116 aa18.2■□□□□ 0.5
CTSA-203ENST00000372459 C1orf158Q8N1D5 194 aa18.19■□□□□ 0.5
CTSA-203ENST00000372459 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.19■□□□□ 0.5
CTSA-203ENST00000372459 TRBV6-5A0A0K0K1A5 114 aa18.19■□□□□ 0.5
CTSA-203ENST00000372459 M0QY20 66 aa18.19■□□□□ 0.5
CTSA-203ENST00000372459 A8MWV9 139 aa18.18■□□□□ 0.5
CTSA-203ENST00000372459 POLR2KP53803 58 aaKnown RBP18.18■□□□□ 0.5
CTSA-203ENST00000372459 WFDC10AQ9H1F0 79 aa18.18■□□□□ 0.5
CTSA-203ENST00000372459 ZMAT4Q9H898 229 aa18.18■□□□□ 0.5
CTSA-203ENST00000372459 K7EP13 123 aa18.17■□□□□ 0.5
CTSA-203ENST00000372459 VCYO14598 125 aa18.17■□□□□ 0.5
CTSA-203ENST00000372459 PRSS1P07477 247 aa18.17■□□□□ 0.5
CTSA-203ENST00000372459 ODF1Q14990 250 aa18.17■□□□□ 0.5
CTSA-203ENST00000372459 OR4C5Q8NGB2 326 aa18.17■□□□□ 0.5
CTSA-203ENST00000372459 DKK2Q9UBU2 259 aa18.17■□□□□ 0.5
CTSA-203ENST00000372459 IGHV3OR16-12A0A075B7B8 117 aa18.16■□□□□ 0.5
CTSA-203ENST00000372459 HSD52Q0P140 79 aa18.15■□□□□ 0.5
CTSA-203ENST00000372459 TOMM6Q96B49 74 aa18.15■□□□□ 0.5
CTSA-203ENST00000372459 SDHAF1A6NFY7 115 aa18.15■□□□□ 0.5
CTSA-203ENST00000372459 INSL3P51460 131 aa18.15■□□□□ 0.5
CTSA-203ENST00000372459 KIR2DL4Q99706 377 aa18.15■□□□□ 0.5
CTSA-203ENST00000372459 CITED1Q99966 193 aa18.15■□□□□ 0.5
CTSA-203ENST00000372459 MORN3Q6PF18 240 aaPredicted RBP18.14■□□□□ 0.49
CTSA-203ENST00000372459 NEGR1Q7Z3B1 354 aa18.14■□□□□ 0.49
CTSA-203ENST00000372459 H7C1H1 209 aa18.13■□□□□ 0.49
CTSA-203ENST00000372459 AZU1P20160 251 aa18.13■□□□□ 0.49
CTSA-203ENST00000372459 EDA2RQ9HAV5 297 aa18.13■□□□□ 0.49
CTSA-203ENST00000372459 TRBV27A0A0K0K1C4 114 aa18.13■□□□□ 0.49
CTSA-203ENST00000372459 RPL35AP18077 110 aaKnown RBP18.13■□□□□ 0.49
CTSA-203ENST00000372459 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.12■□□□□ 0.49
CTSA-203ENST00000372459 C2orf66Q6UXQ4 117 aa18.12■□□□□ 0.49
CTSA-203ENST00000372459 C1QTNF4Q9BXJ3 329 aa18.12■□□□□ 0.49
CTSA-203ENST00000372459 A6NDN8 102 aa18.11■□□□□ 0.49
CTSA-203ENST00000372459 GIG44P09565 113 aaPredicted RBP18.11■□□□□ 0.49
CTSA-203ENST00000372459 C9orf66Q5T8R8 295 aa18.11■□□□□ 0.49
CTSA-203ENST00000372459 UFSP1Q6NVU6 142 aa18.11■□□□□ 0.49
CTSA-203ENST00000372459 SCGB3A1Q96QR1 104 aa18.11■□□□□ 0.49
CTSA-203ENST00000372459 CBY1Q9Y3M2 126 aa18.11■□□□□ 0.49
CTSA-203ENST00000372459 NMUP48645 174 aa18.11■□□□□ 0.49
CTSA-203ENST00000372459 MRPL16Q9NX20 251 aaKnown RBP18.11■□□□□ 0.49
CTSA-203ENST00000372459 IGHV3-73A0A0B4J1V6 119 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 CFAP126Q5VTH2 177 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 RHODO00212 210 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 IGKCP01834 107 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 ZFP2Q6ZN57 461 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 ERASQ7Z444 233 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 IL17DQ8TAD2 202 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 RNASE8Q8TDE3 154 aaKnown RBP18.1■□□□□ 0.49
CTSA-203ENST00000372459 HHLA3Q9XRX5 114 aa18.1■□□□□ 0.49
CTSA-203ENST00000372459 LINC01549A6NIU2 74 aa18.09■□□□□ 0.49
CTSA-203ENST00000372459 PCP2Q8IVA1 136 aa18.09■□□□□ 0.49
CTSA-203ENST00000372459 TMEM263Q8WUH6 116 aaKnown RBP18.09■□□□□ 0.49
CTSA-203ENST00000372459 AMMECR1LQ6DCA0 310 aa18.08■□□□□ 0.49
CTSA-203ENST00000372459 GTSCR1Q86UQ5 136 aa18.08■□□□□ 0.49
CTSA-203ENST00000372459 NIPBLQ6KC79 2804 aaeCLIP18.08■□□□□ 0.49
CTSA-203ENST00000372459 H3BRM9 83 aa18.08■□□□□ 0.48
CTSA-203ENST00000372459 DPM2O94777 84 aa18.08■□□□□ 0.48
CTSA-203ENST00000372459 CYSLTR1Q9Y271 337 aa18.08■□□□□ 0.48
CTSA-203ENST00000372459 TRAV8-6A0A0B4J262 113 aa18.06■□□□□ 0.48
CTSA-203ENST00000372459 RS1O15537 224 aa18.06■□□□□ 0.48
CTSA-203ENST00000372459 HIGD1BQ9P298 99 aa18.06■□□□□ 0.48
CTSA-203ENST00000372459 TCTAP57738 103 aa18.06■□□□□ 0.48
CTSA-203ENST00000372459 A0A087WX48 190 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 TRAV12-1A0A0B4J245 112 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 RIPPLY3P57055 190 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 SPATA3Q8NHX4 192 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 I3L3M4 83 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 CSNK1G2-AS1Q8NCQ2 148 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 TP53TG1Q9Y2A0 90 aa18.04■□□□□ 0.48
CTSA-203ENST00000372459 C9orf118A6NHY6 69 aa18.03■□□□□ 0.48
CTSA-203ENST00000372459 RHOHQ15669 191 aa18.03■□□□□ 0.48
CTSA-203ENST00000372459 DEFB104AQ8WTQ1 72 aa18.03■□□□□ 0.48
CTSA-203ENST00000372459 C16orf74Q96GX8 76 aa18.03■□□□□ 0.48
CTSA-203ENST00000372459 NACAE9PAV3 2078 aa18.03■□□□□ 0.48
CTSA-203ENST00000372459 F8P00451 2351 aa18.03■□□□□ 0.48
CTSA-203ENST00000372459 IGKV2D-26A0A0A0MRZ7 120 aa18.02■□□□□ 0.48
CTSA-203ENST00000372459 TRGV1A0A0A0MS02 117 aa18.02■□□□□ 0.48
CTSA-203ENST00000372459 MRPL35Q9NZE8 188 aaKnown RBP18.02■□□□□ 0.47
CTSA-203ENST00000372459 TNFRSF18Q9Y5U5 241 aa18.02■□□□□ 0.47
CTSA-203ENST00000372459 IGHV3-53P01767 116 aa18.01■□□□□ 0.47
CTSA-203ENST00000372459 P0DMU3 169 aa18.01■□□□□ 0.47
CTSA-203ENST00000372459 FAM231AP0DMU4 169 aa18.01■□□□□ 0.47
CTSA-203ENST00000372459 FAM231CP0DMU5 169 aa18.01■□□□□ 0.47
CTSA-203ENST00000372459 JMJD1CQ15652 2540 aa18.01■□□□□ 0.47
CTSA-203ENST00000372459 ZC2HC1BQ5TFG8 222 aa18■□□□□ 0.47
CTSA-203ENST00000372459 Q6ZSN1 163 aa18■□□□□ 0.47
CTSA-203ENST00000372459 NEXN-AS1Q8NBZ9 246 aa18■□□□□ 0.47
CTSA-203ENST00000372459 FLNBO75369 2602 aaKnown RBP18■□□□□ 0.47
CTSA-203ENST00000372459 TSHBP01222 138 aa18■□□□□ 0.47
CTSA-203ENST00000372459 RBX1P62877 108 aa18■□□□□ 0.47
CTSA-203ENST00000372459 DAZ2Q13117 558 aaKnown RBP18■□□□□ 0.47
CTSA-203ENST00000372459 BAALCQ8WXS3 180 aa18■□□□□ 0.47
CTSA-203ENST00000372459 PLNP26678 52 aa17.99■□□□□ 0.47
CTSA-203ENST00000372459 RRN3P1Q2M238 152 aa17.99■□□□□ 0.47
CTSA-203ENST00000372459 IGIPA6NJ69 53 aa17.98■□□□□ 0.47
CTSA-203ENST00000372459 F8VRH5 84 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms