RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 FREM1Q5H8C1 2179 aa14.93□□□□□ -0.02
LMO4-202ENST00000370544 DAND5Q8N907 189 aa14.93□□□□□ -0.02
LMO4-202ENST00000370544 BDP1A6H8Y1 2624 aa14.93□□□□□ -0.02
LMO4-202ENST00000370544 C11orf86A6NJI1 115 aa14.93□□□□□ -0.02
LMO4-202ENST00000370544 ZNF295-AS1Q8N0V1 137 aa14.93□□□□□ -0.02
LMO4-202ENST00000370544 E9PLD3 99 aa14.92□□□□□ -0.02
LMO4-202ENST00000370544 TTTY13Q9BZ97 58 aa14.92□□□□□ -0.02
LMO4-202ENST00000370544 NDUFA1O15239 70 aa14.92□□□□□ -0.02
LMO4-202ENST00000370544 H0YGX0 51 aa14.92□□□□□ -0.02
LMO4-202ENST00000370544 PLA2G5P39877 138 aa14.91□□□□□ -0.02
LMO4-202ENST00000370544 CRYGBP07316 175 aa14.91□□□□□ -0.02
LMO4-202ENST00000370544 HIGD1BQ9P298 99 aa14.91□□□□□ -0.02
LMO4-202ENST00000370544 C20orf203Q8NBC4 194 aa14.91□□□□□ -0.02
LMO4-202ENST00000370544 CRYBA4P53673 196 aa14.9□□□□□ -0.02
LMO4-202ENST00000370544 IGLV2-8P01709 118 aa14.9□□□□□ -0.02
LMO4-202ENST00000370544 NDUFA11Q86Y39 141 aa14.9□□□□□ -0.02
LMO4-202ENST00000370544 ODF1Q14990 250 aa14.9□□□□□ -0.02
LMO4-202ENST00000370544 LGALS9O00182 355 aa14.9□□□□□ -0.02
LMO4-202ENST00000370544 FXYD2P54710 66 aa14.89□□□□□ -0.03
LMO4-202ENST00000370544 LINC00322Q6ZN03 302 aaPredicted RBP14.89□□□□□ -0.03
LMO4-202ENST00000370544 PRO0255Q9UI72 69 aa14.89□□□□□ -0.03
LMO4-202ENST00000370544 WFDC11Q8NEX6 87 aa14.89□□□□□ -0.03
LMO4-202ENST00000370544 LY6LH3BQJ8 138 aa14.89□□□□□ -0.03
LMO4-202ENST00000370544 TP53TG3Q9ULZ0 132 aa14.89□□□□□ -0.03
LMO4-202ENST00000370544 A0A1B0GXF2 115 aa14.88□□□□□ -0.03
LMO4-202ENST00000370544 C11orf71Q6IPW1 123 aa14.88□□□□□ -0.03
LMO4-202ENST00000370544 CXCL5P42830 114 aa14.88□□□□□ -0.03
LMO4-202ENST00000370544 ODF3Q96PU9 254 aa14.88□□□□□ -0.03
LMO4-202ENST00000370544 NCR3O14931 201 aa14.88□□□□□ -0.03
LMO4-202ENST00000370544 KLK12Q9UKR0 248 aa14.88□□□□□ -0.03
LMO4-202ENST00000370544 TRBV10-1A0A0K0K1A3 114 aa14.87□□□□□ -0.03
LMO4-202ENST00000370544 TNRC6AQ8NDV7 1962 aaKnown RBP14.87□□□□□ -0.03
LMO4-202ENST00000370544 OPRPNQ99935 248 aaPredicted RBP14.87□□□□□ -0.03
LMO4-202ENST00000370544 PTPRQQ9UMZ3 2332 aa14.87□□□□□ -0.03
LMO4-202ENST00000370544 PCDH15Q96QU1 1955 aa14.87□□□□□ -0.03
LMO4-202ENST00000370544 EBI3Q14213 229 aa14.87□□□□□ -0.03
LMO4-202ENST00000370544 RS1O15537 224 aa14.87□□□□□ -0.03
LMO4-202ENST00000370544 SPAG11BQ08648 103 aa14.87□□□□□ -0.03
LMO4-202ENST00000370544 IGHV1-58A0A0C4DH39 117 aa14.86□□□□□ -0.03
LMO4-202ENST00000370544 MUC22E2RYF6 1773 aaPredicted RBP14.85□□□□□ -0.03
LMO4-202ENST00000370544 FUSP35637 526 aaKnown RBP eCLIP14.85□□□□□ -0.03
LMO4-202ENST00000370544 NCOA6Q14686 2063 aaPredicted RBP14.85□□□□□ -0.03
LMO4-202ENST00000370544 K7EQG2 157 aa14.85□□□□□ -0.03
LMO4-202ENST00000370544 ALPK3Q96L96 1907 aa14.85□□□□□ -0.03
LMO4-202ENST00000370544 ACYP1P07311 99 aa14.84□□□□□ -0.03
LMO4-202ENST00000370544 NUP210LQ5VU65 1888 aa14.84□□□□□ -0.03
LMO4-202ENST00000370544 C20orf173Q96LM9 149 aa14.84□□□□□ -0.03
LMO4-202ENST00000370544 TM2D2Q9BX73 214 aa14.84□□□□□ -0.03
LMO4-202ENST00000370544 IGLC6P0CF74 106 aa14.84□□□□□ -0.03
LMO4-202ENST00000370544 CEMP1Q6PRD7 247 aaPredicted RBP14.84□□□□□ -0.03
LMO4-202ENST00000370544 TRACP01848 142 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 P0DMU3 169 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 FAM231AP0DMU4 169 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 FAM231CP0DMU5 169 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 Q6ZTI0 123 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 DEFB114Q30KQ6 69 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 Q6ZUT4 128 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 MLST8Q9BVC4 326 aa14.83□□□□□ -0.04
LMO4-202ENST00000370544 LINC01620Q4KN68 170 aa14.82□□□□□ -0.04
LMO4-202ENST00000370544 NDUFS5O43920 106 aa14.82□□□□□ -0.04
LMO4-202ENST00000370544 KLK5Q9Y337 293 aaPredicted RBP14.81□□□□□ -0.04
LMO4-202ENST00000370544 MIR7-3HGQ8N6C7 128 aa14.81□□□□□ -0.04
LMO4-202ENST00000370544 ZFAND3Q9H8U3 227 aa14.81□□□□□ -0.04
LMO4-202ENST00000370544 ANKHD1Q8IWZ3 2542 aaKnown RBP14.81□□□□□ -0.04
LMO4-202ENST00000370544 GDF5OSQ5U4N7 250 aa14.8□□□□□ -0.04
LMO4-202ENST00000370544 ZNF843Q8N446 348 aa14.8□□□□□ -0.04
LMO4-202ENST00000370544 NFE4Q86UQ8 179 aa14.78□□□□□ -0.04
LMO4-202ENST00000370544 INAFM1C9JVW0 142 aa14.78□□□□□ -0.04
LMO4-202ENST00000370544 H3BQ85 93 aa14.78□□□□□ -0.04
LMO4-202ENST00000370544 Q6ZSV7 163 aa14.78□□□□□ -0.04
LMO4-202ENST00000370544 IGHV4-28A0A0C4DH34 117 aa14.77□□□□□ -0.04
LMO4-202ENST00000370544 C11orf45Q8TAV5 145 aa14.77□□□□□ -0.04
LMO4-202ENST00000370544 TRAV26-1A0A087WT03 109 aa14.77□□□□□ -0.04
LMO4-202ENST00000370544 PLCE1Q9P212 2302 aa14.77□□□□□ -0.04
LMO4-202ENST00000370544 TAX1BP3O14907 124 aa14.77□□□□□ -0.05
LMO4-202ENST00000370544 LECT2O14960 151 aa14.77□□□□□ -0.05
LMO4-202ENST00000370544 UBE2AP49459 152 aa14.77□□□□□ -0.05
LMO4-202ENST00000370544 SPATA12Q7Z6I5 190 aa14.76□□□□□ -0.05
LMO4-202ENST00000370544 CITED1Q99966 193 aa14.76□□□□□ -0.05
LMO4-202ENST00000370544 ACACBO00763 2458 aa14.76□□□□□ -0.05
LMO4-202ENST00000370544 TEN1Q86WV5 123 aa14.76□□□□□ -0.05
LMO4-202ENST00000370544 CHD3Q12873 2000 aaKnown RBP14.75□□□□□ -0.05
LMO4-202ENST00000370544 CLEC2BQ92478 149 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 DIRC1Q969H9 104 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 FAM222AQ5U5X8 452 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 C10orf99Q6UWK7 81 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 C10orf142B7Z368 130 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 SMIM9A6NGZ8 99 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 ZFAND2AQ8N6M9 145 aa14.75□□□□□ -0.05
LMO4-202ENST00000370544 A0A0B4J2C4 111 aa14.74□□□□□ -0.05
LMO4-202ENST00000370544 LYRM9A8MSI8 78 aa14.74□□□□□ -0.05
LMO4-202ENST00000370544 MBD6Q96DN6 1003 aa14.74□□□□□ -0.05
LMO4-202ENST00000370544 WFDC2Q14508 124 aa14.73□□□□□ -0.05
LMO4-202ENST00000370544 HIVEP2P31629 2446 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 MED12LQ86YW9 2145 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 LINC00269Q8N2A0 174 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 CUL9Q8IWT3 2517 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 PCNX3Q9H6A9 2034 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 MIAQ16674 131 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 LINC00467Q9BRT7 94 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms