RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SPRY2O43597 315 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 RNASE1P07998 156 aaKnown RBP4□□□□□ -1.77
SMNDC1-202ENST00000369603 Q6ZS46 218 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 NDUFA11Q86Y39 141 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 TOMM6Q96B49 74 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 TIMM17AQ99595 171 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 CNFNQ9BYD5 112 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 ZNF462Q96JM2 2506 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 SONP18583 2426 aaKnown RBP4□□□□□ -1.77
SMNDC1-202ENST00000369603 TRAV13-1A0A0B4J241 112 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 CRPP02741 224 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 SCGB1A1P11684 91 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 GATD1Q8NB37 220 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 NOP10Q9NPE3 64 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 ERG28Q9UKR5 140 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 DNAL4O96015 105 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 SS18Q15532 418 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 C10orf99Q6UWK7 81 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 MDFICQ9P1T7 246 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 IGHV4-4A0A075B6R2 117 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 KLLNB2CW77 178 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 KRTAP10-9P60411 292 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 PPDPFLQ8WWR9 84 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 RBMY1BA6NDE4 496 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 RBMY1EA6NEQ0 496 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 RBMY1DP0C7P1 496 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 RBMY1A1P0DJD3 496 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 RBMY1CP0DJD4 496 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 HERVK_113P63121 156 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 CFHR3Q02985 330 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 DAZ2Q13117 558 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 C2orf91Q6ZV80 131 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 OR13C6PQ8NH95 151 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 DCANP1Q8TF63 244 aa3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 DAZ3Q9NR90 486 aaKnown RBP3.99□□□□□ -1.77
SMNDC1-202ENST00000369603 TLN2Q9Y4G6 2542 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 IGHV3-38A0A0C4DH36 116 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 C9JAW5 83 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 J3QQQ9 107 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 URB1-AS1Q96HZ7 61 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 BBC3Q96PG8 261 aaPredicted RBP3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 SORL1Q92673 2214 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 TRBV10-1A0A0K0K1A3 114 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 TSPAN13O95857 204 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 PRIMA1Q86XR5 153 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 HIGD1BQ9P298 99 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 TRAV8-4A0A0B4J246 113 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 K7EQD1 137 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 HILS1P60008 231 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 ODF1Q14990 250 aa3.98□□□□□ -1.77
SMNDC1-202ENST00000369603 LINC00158P58513 81 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 RNF185Q96GF1 192 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 ZFYVE26Q68DK2 2539 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 TRBV7-3A0A075B6L6 115 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 F5H768 121 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 C6orf226Q5I0X4 101 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 LINC01006Q8NI28 216 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 NDUFA12Q9UI09 145 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 PAX4O43316 350 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 RPL32P62910 135 aaKnown RBP3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 C10orf126Q8N4M7 172 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 C20orf203Q8NBC4 194 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 C11orf21Q9P2W6 132 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 TRBV20-1A0A075B6N2 111 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 KLK9Q2XQG4 91 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 BAALCQ8WXS3 180 aa3.97□□□□□ -1.77
SMNDC1-202ENST00000369603 LEPROTO15243 131 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 HIST2H2BCQ6DN03 193 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 JPT2Q9H910 190 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 TRAV26-1A0A087WT03 109 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 TRAV4A0A0B4J268 109 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 NDUFA7O95182 113 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 RNASE3P12724 160 aaKnown RBP3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 PIK3CD-AS1Q5SR53 167 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 PRR9Q5T870 116 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 ZNF292O60281 2723 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 PRUNE2Q8WUY3 3088 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 TRBV6-5A0A0K0K1A5 114 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 E9PLD3 99 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 GHRHP01286 108 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 FGF6P10767 208 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 GAGE6Q13070 117 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 ABCA12Q86UK0 2595 aa3.96□□□□□ -1.78
SMNDC1-202ENST00000369603 IGKV2D-26A0A0A0MRZ7 120 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 SOCS3O14543 225 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 RPL39P62891 51 aaKnown RBP3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 C2orf82Q6UX34 121 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 SMIM9A6NGZ8 99 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 SPART-AS1P0CW21 52 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 CRYBA4P53673 196 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 ATXN8Q156A1 80 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 C9orf85Q96MD7 179 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 C2CD3Q4AC94 2353 aa3.95□□□□□ -1.78
SMNDC1-202ENST00000369603 LY6G6DO95868 133 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms