RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 UQCRQO14949 82 aa12.04□□□□□ -0.48
CHD1L-203ENST00000369259 C20orf203Q8NBC4 194 aa12.04□□□□□ -0.48
CHD1L-203ENST00000369259 CUL9Q8IWT3 2517 aa12.03□□□□□ -0.48
CHD1L-203ENST00000369259 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
CHD1L-203ENST00000369259 MIAQ16674 131 aa12.03□□□□□ -0.48
CHD1L-203ENST00000369259 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
CHD1L-203ENST00000369259 ABCA4P78363 2273 aa12.02□□□□□ -0.48
CHD1L-203ENST00000369259 CNOT1A5YKK6 2376 aaKnown RBP12.02□□□□□ -0.49
CHD1L-203ENST00000369259 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
CHD1L-203ENST00000369259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
CHD1L-203ENST00000369259 NPFFO15130 113 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 DEFB123Q8N688 67 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 LINC00526Q96FQ7 95 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 M0QY20 66 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 HERVK_113P63121 156 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
CHD1L-203ENST00000369259 NDUFA12Q9UI09 145 aa12□□□□□ -0.49
CHD1L-203ENST00000369259 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
CHD1L-203ENST00000369259 LY6HO94772 140 aa12□□□□□ -0.49
CHD1L-203ENST00000369259 NPC2P61916 151 aa12□□□□□ -0.49
CHD1L-203ENST00000369259 C5orf47Q569G3 176 aa12□□□□□ -0.49
CHD1L-203ENST00000369259 PCNX1Q96RV3 2341 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 ATP5G1P05496 136 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
CHD1L-203ENST00000369259 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 DCANP1Q8TF63 244 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 IGHV1-58A0A0C4DH39 117 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 KLLNB2CW77 178 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 LRRC75A-AS1Q8N1F1 130 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 LINC00527Q9UJ94 153 aa11.99□□□□□ -0.49
CHD1L-203ENST00000369259 ADGRG4Q8IZF6 3080 aa11.98□□□□□ -0.49
CHD1L-203ENST00000369259 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
CHD1L-203ENST00000369259 MRPS36P82909 103 aaKnown RBP11.98□□□□□ -0.49
CHD1L-203ENST00000369259 J3KT08 172 aa11.97□□□□□ -0.49
CHD1L-203ENST00000369259 MAP1BP46821 2468 aaKnown RBP11.97□□□□□ -0.49
CHD1L-203ENST00000369259 ATP5J2P56134 94 aa11.97□□□□□ -0.49
CHD1L-203ENST00000369259 DUX5Q96PT3 197 aa11.97□□□□□ -0.49
CHD1L-203ENST00000369259 A0A1B0GX51 115 aa11.96□□□□□ -0.49
CHD1L-203ENST00000369259 CD28P10747 220 aa11.95□□□□□ -0.5
CHD1L-203ENST00000369259 VSIG2Q96IQ7 327 aa11.95□□□□□ -0.5
CHD1L-203ENST00000369259 IGKV3-7A0A075B6H7 116 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 NDUFA4O00483 81 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 CXCL5P42830 114 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 SDIM1Q6ZPB5 146 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 C9orf85Q96MD7 179 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
CHD1L-203ENST00000369259 PYGO1Q9Y3Y4 419 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 SMIM9A6NGZ8 99 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 COX7CP15954 63 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
CHD1L-203ENST00000369259 CACNA1BQ00975 2339 aa11.94□□□□□ -0.5
CHD1L-203ENST00000369259 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
CHD1L-203ENST00000369259 TRAV12-3A0A0B4J271 114 aa11.93□□□□□ -0.5
CHD1L-203ENST00000369259 TIMM17BO60830 172 aa11.93□□□□□ -0.5
CHD1L-203ENST00000369259 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
CHD1L-203ENST00000369259 FAM104AQ969W3 186 aa11.93□□□□□ -0.5
CHD1L-203ENST00000369259 IGHV3-16A0A0C4DH30 117 aa11.93□□□□□ -0.5
CHD1L-203ENST00000369259 A8MZ25 164 aa11.92□□□□□ -0.5
CHD1L-203ENST00000369259 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
CHD1L-203ENST00000369259 CITED2Q99967 270 aaPredicted RBP11.92□□□□□ -0.5
CHD1L-203ENST00000369259 LINC01560Q8TB33 94 aa11.92□□□□□ -0.5
CHD1L-203ENST00000369259 TRAV41A0A0B4J266 112 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 DEFB124Q8NES8 71 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 APC2O95996 2303 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 COX7A2LO14548 114 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 CRYGAP11844 174 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
CHD1L-203ENST00000369259 GAGE2AQ6NT46 116 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 SIRPDQ9H106 197 aa11.91□□□□□ -0.5
CHD1L-203ENST00000369259 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
CHD1L-203ENST00000369259 RPS28P62857 69 aaKnown RBP11.9□□□□□ -0.5
CHD1L-203ENST00000369259 DAZ2Q13117 558 aaKnown RBP11.9□□□□□ -0.5
CHD1L-203ENST00000369259 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
CHD1L-203ENST00000369259 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
CHD1L-203ENST00000369259 DAZ1Q9NQZ3 744 aaKnown RBP11.9□□□□□ -0.5
CHD1L-203ENST00000369259 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
CHD1L-203ENST00000369259 C5orf56Q8N8D9 126 aa11.9□□□□□ -0.51
CHD1L-203ENST00000369259 DAND5Q8N907 189 aa11.9□□□□□ -0.51
CHD1L-203ENST00000369259 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
CHD1L-203ENST00000369259 RNASE13Q5GAN3 156 aaKnown RBP11.89□□□□□ -0.51
CHD1L-203ENST00000369259 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
CHD1L-203ENST00000369259 SAA4P35542 130 aa11.88□□□□□ -0.51
CHD1L-203ENST00000369259 C19orf54Q5BKX5 351 aa11.88□□□□□ -0.51
CHD1L-203ENST00000369259 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
CHD1L-203ENST00000369259 CACNA1HO95180 2353 aa11.87□□□□□ -0.51
CHD1L-203ENST00000369259 IGF2-ASQ6U949 168 aa11.87□□□□□ -0.51
CHD1L-203ENST00000369259 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
CHD1L-203ENST00000369259 HIST1H4AP62805 103 aaKnown RBP11.86□□□□□ -0.51
CHD1L-203ENST00000369259 ATOX1O00244 68 aa11.86□□□□□ -0.51
CHD1L-203ENST00000369259 TRACP01848 142 aa11.86□□□□□ -0.51
CHD1L-203ENST00000369259 OR13C6PQ8NH95 151 aa11.86□□□□□ -0.51
CHD1L-203ENST00000369259 TIRAPP58753 221 aa11.85□□□□□ -0.51
CHD1L-203ENST00000369259 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
CHD1L-203ENST00000369259 LINC00308Q8TCZ7 52 aa11.85□□□□□ -0.51
CHD1L-203ENST00000369259 NDUFA1O15239 70 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms