RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 DLX4Q92988 240 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-206ENST00000368215 SNCGO76070 127 aa6.38□□□□□ -1.39
PTPRK-206ENST00000368215 RNASE8Q8TDE3 154 aaKnown RBP6.38□□□□□ -1.39
PTPRK-206ENST00000368215 A0A0J9YXV3 536 aa6.38□□□□□ -1.39
PTPRK-206ENST00000368215 ANKRD17O75179 2603 aaKnown RBP6.37□□□□□ -1.39
PTPRK-206ENST00000368215 IGKV2D-26A0A0A0MRZ7 120 aa6.37□□□□□ -1.39
PTPRK-206ENST00000368215 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
PTPRK-206ENST00000368215 GTSF1LQ9H1H1 148 aa6.37□□□□□ -1.39
PTPRK-206ENST00000368215 U3KQK5 164 aa6.37□□□□□ -1.39
PTPRK-206ENST00000368215 TOMM6Q96B49 74 aa6.37□□□□□ -1.39
PTPRK-206ENST00000368215 MAP1AP78559 2803 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-206ENST00000368215 C11orf86A6NJI1 115 aa6.37□□□□□ -1.39
PTPRK-206ENST00000368215 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
PTPRK-206ENST00000368215 P0DMU3 169 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 FAM231AP0DMU4 169 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 FAM231CP0DMU5 169 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 PRIMA1Q86XR5 153 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 COPS9Q8WXC6 57 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 NOP10Q9NPE3 64 aaKnown RBP6.36□□□□□ -1.39
PTPRK-206ENST00000368215 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-206ENST00000368215 TRBV7-9A0A0J9YWB2 115 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 IGHV4-31P0DP07 118 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 LINC00158P58513 81 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 C1QTNF4Q9BXJ3 329 aa6.36□□□□□ -1.39
PTPRK-206ENST00000368215 FASNP49327 2511 aaKnown RBP6.36□□□□□ -1.39
PTPRK-206ENST00000368215 J3QKU1 62 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 C9JAW5 83 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 CMC4P56277 68 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-206ENST00000368215 K7EQG2 157 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 DNAL4O96015 105 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 RHOHQ15669 191 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 CEMP1Q6PRD7 247 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-206ENST00000368215 WFDC11Q8NEX6 87 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 PRM2P04554 102 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 TAL2Q16559 108 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 MORN3Q6PF18 240 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-206ENST00000368215 C18orf65Q6ZTR6 163 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 PIFOQ8TCI5 191 aa6.35□□□□□ -1.39
PTPRK-206ENST00000368215 SPAG8Q99932 426 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-206ENST00000368215 GAGE6Q13070 117 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 IGLL5B9A064 214 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 FGF6P10767 208 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 PSMB8P28062 276 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 NRACQ8N912 160 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 A0A096LPF7 62 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
PTPRK-206ENST00000368215 RNASE3P12724 160 aaKnown RBP6.34□□□□□ -1.39
PTPRK-206ENST00000368215 KRTAP10-9P60411 292 aa6.34□□□□□ -1.4
PTPRK-206ENST00000368215 Q6YL49 198 aa6.34□□□□□ -1.4
PTPRK-206ENST00000368215 TNRC18O15417 2968 aaPredicted RBP6.33□□□□□ -1.4
PTPRK-206ENST00000368215 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
PTPRK-206ENST00000368215 CITED2Q99967 270 aaPredicted RBP6.33□□□□□ -1.4
PTPRK-206ENST00000368215 TMEM89A2RUT3 159 aa6.33□□□□□ -1.4
PTPRK-206ENST00000368215 C2orf91Q6ZV80 131 aa6.33□□□□□ -1.4
PTPRK-206ENST00000368215 SH2D6Q7Z4S9 175 aa6.33□□□□□ -1.4
PTPRK-206ENST00000368215 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
PTPRK-206ENST00000368215 TSSC4Q9Y5U2 329 aaPredicted RBP6.33□□□□□ -1.4
PTPRK-206ENST00000368215 E9PLD3 99 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 HIGD1BQ9P298 99 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 MALP21145 153 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 ZNF843Q8N446 348 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 AGRNO00468 2067 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 A0A096LNJ9 63 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 PROK1P58294 105 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 MAP6D1Q9H9H5 199 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 TMEM243Q9BU79 118 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
PTPRK-206ENST00000368215 TEX48A0A1B0GUV7 120 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 A0A1B0GV72 72 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 PAX4O43316 350 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 DCANP1Q8TF63 244 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 TIMM17AQ99595 171 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 H3BMM0 161 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 WFDC2Q14508 124 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 C2orf82Q6UX34 121 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 C4orf3Q8WVX3 66 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 ZNF702PQ9H963 129 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 ADGRG4Q8IZF6 3080 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 F8W1H4 67 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 PFN2P35080 140 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
PTPRK-206ENST00000368215 A4D1N5 150 aa6.3□□□□□ -1.4
PTPRK-206ENST00000368215 TTC32Q5I0X7 151 aa6.3□□□□□ -1.4
PTPRK-206ENST00000368215 CLPSL2Q6UWE3 100 aa6.3□□□□□ -1.4
PTPRK-206ENST00000368215 LEPROTO15243 131 aa6.3□□□□□ -1.4
PTPRK-206ENST00000368215 ATXN8Q156A1 80 aa6.3□□□□□ -1.4
PTPRK-206ENST00000368215 DAND5Q8N907 189 aa6.3□□□□□ -1.4
PTPRK-206ENST00000368215 KLLNB2CW77 178 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 MUSTN1Q8IVN3 82 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 COL27A1Q8IZC6 1860 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-206ENST00000368215 Q6ZSV7 163 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms