RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 DNAJC30Q96LL9 226 aa3.18□□□□□ -1.9
XCL1-201ENST00000367818 GAFA1Q96PS6 74 aa3.18□□□□□ -1.9
XCL1-201ENST00000367818 RPUSD1Q9UJJ7 312 aaKnown RBP3.18□□□□□ -1.9
XCL1-201ENST00000367818 SMAD5-AS1Q9Y6J3 95 aa3.18□□□□□ -1.9
XCL1-201ENST00000367818 SVEP1Q4LDE5 3571 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 IGKV1D-17A0A075B6S4 117 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 TRAV8-2A0A0B4J237 113 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 H3BUX3 64 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 NPFFO15130 113 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 IGLV2-11P01706 119 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 CCL3L1P16619 93 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 ID1P41134 155 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 UBE2D3P61077 147 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 UBE2D2P62837 147 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 DIAPH2-AS1Q14236 149 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 PLGLAQ15195 96 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 NSUN5P1Q3KNT7 163 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 FAM53AQ6NSI3 398 aaPredicted RBP3.17□□□□□ -1.9
XCL1-201ENST00000367818 MORN3Q6PF18 240 aaPredicted RBP3.17□□□□□ -1.9
XCL1-201ENST00000367818 Q6ZSV7 163 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 C9orf139Q6ZV77 190 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 AMN1Q8IY45 258 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 LYPD1Q8N2G4 141 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 LINC00311Q8N616 119 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 CD177Q8N6Q3 437 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 LINC01006Q8NI28 216 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 NPIPB3Q92617 1050 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 FLYWCH2Q96CP2 140 aaKnown RBP3.17□□□□□ -1.9
XCL1-201ENST00000367818 SGK494Q96LW2 274 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 TRGV9Q99603 122 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 RNF5Q99942 180 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 SRSF8Q9BRL6 282 aaKnown RBP3.17□□□□□ -1.9
XCL1-201ENST00000367818 DCTN5Q9BTE1 182 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 TMEM14CQ9P0S9 112 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 KAAG1Q9UBP8 84 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 WNK1Q9H4A3 2382 aa3.17□□□□□ -1.9
XCL1-201ENST00000367818 TRAV12-1A0A0B4J245 112 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 TRAV8-4A0A0B4J246 113 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 TMEM213A2RRL7 107 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 H3BVH4 76 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 SAA2P0DJI9 122 aaPredicted RBP3.16□□□□□ -1.9
XCL1-201ENST00000367818 CGB3P0DN86 165 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 CGB7P0DN87 165 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 GP9P14770 177 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 MYOD1P15172 320 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 ORM2P19652 201 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 SAA4P35542 130 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 UBE2D1P51668 147 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 HES1Q14469 280 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 TMEM78Q5T7P6 136 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 FAM159AQ6UWV7 190 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 ZNF833PQ6ZTB9 187 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 GOLT1AQ6ZVE7 132 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 TMEM219Q86XT9 240 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 DYNAPQ8N1N2 210 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 ANKRD29Q8N6D5 301 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 MAPKAPK5-AS1Q8N8E1 139 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 Q8N8P6 123 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 LY6G5BQ8NDX9 201 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 OR13C6PQ8NH95 151 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 KIR2DL4Q99706 377 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 TPPP3Q9BW30 176 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 TTTY13Q9BZ97 58 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 NDUFA4L2Q9NRX3 87 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 HIGD1AQ9Y241 93 aa3.16□□□□□ -1.9
XCL1-201ENST00000367818 CSDC2Q9Y534 153 aaKnown RBP3.16□□□□□ -1.9
XCL1-201ENST00000367818 TENM1Q9UKZ4 2725 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 IGKV1D-37A0A075B6S9 117 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 TRAV4A0A0B4J268 109 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 H7C1H1 209 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 J3KT08 172 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 TIMM23O14925 209 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 SLC25A20O43772 301 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 NDUFA7O95182 113 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 PF4V1P10720 104 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 FXYD7P58549 80 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 SRSF9Q13242 221 aaKnown RBP eCLIP3.15□□□□□ -1.9
XCL1-201ENST00000367818 C17orf58Q2M2W7 97 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 HCP5Q6MZN7 132 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 LINC01600Q96MT4 127 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 AAMDCQ9H7C9 122 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 ZNRD1Q9P1U0 126 aa3.15□□□□□ -1.9
XCL1-201ENST00000367818 TRAV2A0A0B4J234 112 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 TRAV25A0A0B4J276 109 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 A0A1B0GX51 115 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 SMIM9A6NGZ8 99 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 F8VRH5 84 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 K7EMI3 77 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 TNFRSF6BO95407 300 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 TCL1BO95988 128 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 ATP5G1P05496 136 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 LGALS1P09382 135 aaKnown RBP3.14□□□□□ -1.91
XCL1-201ENST00000367818 SAA1P0DJI8 122 aaPredicted RBP3.14□□□□□ -1.91
XCL1-201ENST00000367818 CD28P10747 220 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 HLA-DMBP28068 263 aa3.14□□□□□ -1.91
XCL1-201ENST00000367818 RPL13AP40429 203 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms