RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 WI2-2373I1.2A0A1W2PRP0 233 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-30P01768 117 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-30-5P0DP03 117 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TRAV41A0A0B4J266 112 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 SDIM1Q6ZPB5 146 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 MALRD1Q5VYJ5 2156 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TTTY13Q9BZ97 58 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 DKK2Q9UBU2 259 aa2.88□□□□□ -1.95
SYNE1-207ENST00000367255 TMEM263Q8WUH6 116 aaKnown RBP2.87□□□□□ -1.95
SYNE1-207ENST00000367255 FOCADQ5VW36 1801 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV7-4-1A0A0J9YVY3 117 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 LRCOL1A6NCL2 159 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 ARMS2P0C7Q2 107 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-53P01767 116 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 SPATA3Q8NHX4 192 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 F8P00451 2351 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 CEP192Q8TEP8 1941 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 VMO1Q7Z5L0 202 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 BPY2O14599 106 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1-39P01597 117 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1D-39P04432 117 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 K7ERJ3 54 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 CCKP06307 115 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 PSMG3-AS1Q96PY0 264 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 DLEC1Q9Y238 1755 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 LY6HO94772 140 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 ZNF726P1Q15940 193 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 ESRGQ1W209 222 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 Q8IZM0 81 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 DIRC1Q969H9 104 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 HTN3P15516 51 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 HEATR5BQ9P2D3 2071 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 HELZP42694 1942 aaKnown RBP2.87□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-16A0A0C4DH30 117 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 C2orf91Q6ZV80 131 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 AGPAT4-IT1Q9H0P7 198 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 SBF2Q86WG5 1849 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 SPRNQ5BIV9 151 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 SND1-IT1Q9HBX3 110 aa2.87□□□□□ -1.95
SYNE1-207ENST00000367255 C8orf49Q96NF6 230 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 ZNF491Q8N8L2 437 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1-12A0A0C4DH73 117 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1D-12P01611 117 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGFL2Q6UWQ7 119 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 DEFB1P60022 68 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 TICRRQ7Z2Z1 1910 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 A0A0J9YY99 117 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 COL6A6A6NMZ7 2263 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 TRBV6-4A0A1B0GX49 114 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-11P01762 117 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 GREB1LQ9C091 1923 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1-6A0A0C4DH72 117 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 COX6B1P14854 86 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 EXOC3-AS1Q8N2X6 119 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 KIF26BQ2KJY2 2108 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 RNASE13Q5GAN3 156 aaKnown RBP2.86□□□□□ -1.95
SYNE1-207ENST00000367255 Q9H8V8 135 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGLV5-39A0A0G2JS06 123 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-33P01772 117 aa2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV2-40A0A087WW87 121 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV2D-40P01614 121 aaPredicted RBP2.86□□□□□ -1.95
SYNE1-207ENST00000367255 I3L2K1 104 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 GNLYP22749 145 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 KMT2EQ8IZD2 1858 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 SLC22A18ASQ8N1D0 253 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 MSRB1Q9NZV6 116 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 COL18A1P39060 1754 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 ARID2Q68CP9 1835 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 B3GALT5-AS1P59052 145 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 Q96MF0 132 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 NBL1P41271 181 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 PINLYPA6NC86 204 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 KLLNB2CW77 178 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 WT1-ASQ06250 92 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 K7EQD1 137 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 ZNF503Q96F45 646 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 DAZAP2Q15038 168 aaPredicted RBP2.85□□□□□ -1.95
SYNE1-207ENST00000367255 C2orf16Q68DN1 1984 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 DKK1O94907 266 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 PRM2P04554 102 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 PIP4P2Q8N4L2 257 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 FRMPD3Q5JV73 1810 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 Q8N976 141 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 CELA1Q9UNI1 258 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 IGKV1D-17A0A075B6S4 117 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 SPAARA0A1B0GVQ0 90 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 DEFB105AQ8NG35 78 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 A0A0G2JRQ6 117 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 C10orf55Q5SWW7 151 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 PSPNO60542 156 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 FXYD2P54710 66 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 FAM27E3Q08E93 113 aa2.85□□□□□ -1.95
SYNE1-207ENST00000367255 H3BNG1 76 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 IGLV2-11P01706 119 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms