RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 NDUFA4L2Q9NRX3 87 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 PLEKHJ1Q9NW61 149 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 IL20Q9NYY1 176 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 NDUFA12Q9UI09 145 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 PYCARDQ9ULZ3 195 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 R4GMQ9 66 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 ACACBO00763 2458 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 NCAPD3P42695 1498 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 SETBP1Q9Y6X0 1596 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 CHD7Q9P2D1 2997 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 PAPPA2Q9BXP8 1791 aa-1.39□□□□□ -2.63
MIR539-201ENST00000365690 GCN1Q92616 2671 aaKnown RBP-1.4□□□□□ -2.63
MIR539-201ENST00000365690 FMN2Q9NZ56 1722 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 KIF1BO60333 1816 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 ARFGEF1Q9Y6D6 1849 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 SRCAPQ6ZRS2 3230 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 A0A087WVE0 104 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 FABP12A6NFH5 140 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 H3BQV1 296 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 HMGB3O15347 200 aaKnown RBP-1.4□□□□□ -2.63
MIR539-201ENST00000365690 FGF7P21781 194 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 PCBD1P61457 104 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 SKP1P63208 163 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 SCGB2B2Q4G0G5 96 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 WFDC13Q8IUB5 93 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 DYNLRB2Q8TF09 96 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 STOML2Q9UJZ1 356 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 UFC1Q9Y3C8 167 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 ADCY9O60503 1353 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 NBEAL2Q6ZNJ1 2754 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 PARP14Q460N5 1801 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 SBF2Q86WG5 1849 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 KIAA0556O60303 1618 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 DLC1Q96QB1 1528 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 CCDC171Q6TFL3 1326 aa-1.4□□□□□ -2.63
MIR539-201ENST00000365690 PNMA8CA0A1B0GUJ8 204 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 LINC00959A0A1B0GUT2 108 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CLDN24A6NM45 220 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 PPP5D1E7EU14 171 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CCDC179H3BU77 68 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 I3L3M4 83 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 PGRMC1O00264 195 aaKnown RBP-1.41□□□□□ -2.64
MIR539-201ENST00000365690 ZZEF1O43149 2961 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 NDUFC2O95298 119 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 APOA2P02652 100 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 IFNA16P05015 189 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CALB1P05937 261 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CCDC172P0C7W6 258 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 HIST1H1EP10412 219 aaKnown RBP-1.41□□□□□ -2.64
MIR539-201ENST00000365690 COX5BP10606 129 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CCL18P55774 89 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 MRPS15P82914 257 aaKnown RBP-1.41□□□□□ -2.64
MIR539-201ENST00000365690 PLGLB1Q02325 96 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 SCIMPQ6UWF3 145 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CNPY4Q8N129 248 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 ARL6IP6Q8N6S5 226 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 C7orf50Q9BRJ6 194 aaKnown RBP-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CDC42SE2Q9NRR3 84 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CRIPTQ9P021 101 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CDKN2A-AS1Q9UH64 79 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 PRELID3BQ9Y3B1 194 aa-1.41□□□□□ -2.64
MIR539-201ENST00000365690 CICQ96RK0 1608 aaPredicted RBP-1.41□□□□□ -2.64
MIR539-201ENST00000365690 APOBP04114 4563 aaKnown RBP-1.42□□□□□ -2.64
MIR539-201ENST00000365690 DNAH1Q9P2D7 4330 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 UTP20O75691 2785 aaKnown RBP-1.42□□□□□ -2.64
MIR539-201ENST00000365690 CLPSL1A2RUU4 121 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 RIIAD1A6NNX1 92 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 IQCF5A8MTL0 148 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 AIPO00170 330 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 YPEL1O60688 119 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 PPP1R17O96001 155 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 SMR3BP02814 79 aaPredicted RBP-1.42□□□□□ -2.64
MIR539-201ENST00000365690 S100A6P06703 90 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 CMPK1P30085 196 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 NCALDP61601 193 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 TMED2Q15363 201 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 RTL8BQ17RB0 113 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 CCDC122Q5T0U0 273 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 SELENOSQ9BQE4 189 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 RTL8AQ9BWD3 113 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 MRPL40Q9NQ50 206 aaKnown RBP-1.42□□□□□ -2.64
MIR539-201ENST00000365690 CHMP5Q9NZZ3 219 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 NUP210LQ5VU65 1888 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 ANKRD31Q8N7Z5 1873 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 C9orf84Q5VXU9 1444 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 KALRNO60229 2985 aa-1.42□□□□□ -2.64
MIR539-201ENST00000365690 CAMSAP2Q08AD1 1489 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 COL14A1Q05707 1796 aaKnown RBP-1.43□□□□□ -2.64
MIR539-201ENST00000365690 MAP3K1Q13233 1512 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 TULP4Q9NRJ4 1543 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 ARHGEF12Q9NZN5 1544 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 NBEAQ8NFP9 2946 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 TRBV27A0A0K0K1C4 114 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 A6NIN4 97 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 H3BMG7 143 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 HBDP02042 147 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 CRYGSP22914 178 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 PPP1R2P41236 205 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 UBE2D1P51668 147 aa-1.43□□□□□ -2.64
MIR539-201ENST00000365690 CRYBA4P53673 196 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms