RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MIXL1Q9H2W2 232 aa3.02□□□□□ -1.93
RNU4-39P-201ENST00000362455 TNXBP22105 4242 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 SMIM31A0A1B0GVY4 71 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 C9JQL5 133 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 H7BYZ3 331 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 SLC17A3O00476 420 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 VBP1P61758 197 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 RHOBP62745 196 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 PRR9Q5T870 116 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 ZNF738Q8NE65 137 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 ZNF431Q8TF32 576 aaPredicted RBP3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 BLNKQ8WV28 456 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 PPP1R14BQ96C90 147 aa3.01□□□□□ -1.93
RNU4-39P-201ENST00000362455 TRAV12-3A0A0B4J271 114 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 RBFOX3A6NFN3 312 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3□□□□□ -1.93
RNU4-39P-201ENST00000362455 H3BQ15 152 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 CXorf1O96002 111 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 IFNA5P01569 189 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 WFDC2Q14508 124 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 SMCO1Q147U7 214 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 SURF2Q15527 256 aaPredicted RBP3□□□□□ -1.93
RNU4-39P-201ENST00000362455 LCE3AQ5TA76 89 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 SAMD13Q5VXD3 122 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 Q6ZSA8 131 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 WFDC10BQ8IUB3 73 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 TMEM70Q9BUB7 260 aa3□□□□□ -1.93
RNU4-39P-201ENST00000362455 FAM25AB3EWG3 89 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 FAM25CB3EWG5 89 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 FAM25GB3EWG6 89 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 GABARAPH6UMI1 98 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 SPINK4O60575 86 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 TNFAIP8O95379 198 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 IGHV3-53P01767 116 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 FABP1P07148 127 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 RPL7P18124 248 aaKnown RBP2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 CRYBA4P53673 196 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 CYP2G1PQ6ZSU1 146 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 LINC00467Q9BRT7 94 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 TMEM147Q9BVK8 224 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 SRRQ9GZT4 340 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 VCX3BQ9H321 246 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 TREM1Q9NP99 234 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 RBM12B-AS1Q9P1G2 102 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 C14orf166Q9Y224 244 aaKnown RBP2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 FUT9Q9Y231 359 aa2.99□□□□□ -1.93
RNU4-39P-201ENST00000362455 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 TRAV5A0A0B4J249 113 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 A0A1B0GXF2 115 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 DISC1C4P0D8 188 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 H3BP45 60 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 HYPMO75409 117 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 ATP6V1G2O95670 118 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 CFDP00746 253 aaPredicted RBP2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 IGLC2P0DOY2 106 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 AKR1C4P17516 323 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 FA2HQ7L5A8 372 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 CLVS1Q8IUQ0 354 aaPredicted RBP2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 Q8N814 137 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 SMIM4Q8WVI0 70 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 SEC22CQ9BRL7 303 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 PAIP2BQ9ULR5 123 aaKnown RBP2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 HIGD1AQ9Y241 93 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 ZNF706Q9Y5V0 76 aaPredicted RBP2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
RNU4-39P-201ENST00000362455 TRGV2A0A075B6R0 118 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 K7EPK0 472 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 M0R3E3 92 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 SYNGR2O43760 224 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 COX7A2P2O60397 106 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 ADAP1O75689 374 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 C1QBP02746 253 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 IL5P05113 134 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 OR5G3P0C626 314 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 SFTA3P0C7M3 94 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 AKAIN1P0CW23 69 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 SLC25A6P12236 298 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 TCL1AP56279 114 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 POLR2GP62487 172 aaKnown RBP eCLIP2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 SSBP1Q04837 148 aaKnown RBP2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 SPANXN5Q5MJ07 72 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 DEFB104AQ8WTQ1 72 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 MRPL32Q9BYC8 188 aaKnown RBP2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 ARL6Q9H0F7 186 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 AGPAT4-IT1Q9H0P7 198 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 MRPL16Q9NX20 251 aaKnown RBP2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 CACFD1Q9UGQ2 172 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 PRO0255Q9UI72 69 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 HHLA3Q9XRX5 114 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 LY96Q9Y6Y9 160 aa2.97□□□□□ -1.93
RNU4-39P-201ENST00000362455 C7orf71A4D174 169 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 IBA57-AS1B1ANH7 110 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 HSBP1L1C9JCN9 74 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 SLC25A5P05141 298 aaKnown RBP2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 CRYGDP07320 174 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 CXCL2P19875 107 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms