RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 APODP05090 189 aa0.39□□□□□ -2.35
RNU6-28P-201ENST00000362378 SPTSSBQ8NFR3 76 aa0.39□□□□□ -2.35
RNU6-28P-201ENST00000362378 F5P12259 2224 aa0.39□□□□□ -2.35
RNU6-28P-201ENST00000362378 IFT140Q96RY7 1462 aa0.39□□□□□ -2.35
RNU6-28P-201ENST00000362378 TNCP24821 2201 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 SIPA1L3O60292 1781 aaPredicted RBP0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 UNC13BO14795 1591 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 CFTRP13569 1480 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 APOC4-APOC2K7ER74 178 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 ACYP2P14621 99 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 HIST1H1DP16402 221 aaKnown RBP0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 CCL8P80075 99 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 S100A7L2Q5SY68 101 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 COPS9Q8WXC6 57 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 WFDC6Q9BQY6 131 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 PDCD10Q9BUL8 212 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 SNRNP25Q9BV90 132 aaKnown RBP0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 SCP2D1Q9UJQ7 156 aa0.38□□□□□ -2.35
RNU6-28P-201ENST00000362378 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 SPEF2Q9C093 1822 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 TRGV1A0A0A0MS02 117 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 TMEM14DPA8MWL7 114 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 GNG7O60262 68 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 INSL4Q14641 139 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 SEC11CQ9BY50 192 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 AGPAT4-IT1Q9H0P7 198 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 LRRC37A3O60309 1634 aa0.37□□□□□ -2.35
RNU6-28P-201ENST00000362378 PHLPP1O60346 1717 aa0.36□□□□□ -2.35
RNU6-28P-201ENST00000362378 Q6ZRX8 168 aa0.36□□□□□ -2.35
RNU6-28P-201ENST00000362378 RERGLQ9H628 205 aa0.36□□□□□ -2.35
RNU6-28P-201ENST00000362378 CASKIN1Q8WXD9 1431 aa0.36□□□□□ -2.35
RNU6-28P-201ENST00000362378 ARFGEF1Q9Y6D6 1849 aa0.36□□□□□ -2.35
RNU6-28P-201ENST00000362378 PXDNQ92626 1479 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 FAM25AB3EWG3 89 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 FAM25CB3EWG5 89 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 FAM25GB3EWG6 89 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 NMBP08949 121 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 Q6AWC8 147 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 C1orf54Q8WWF1 131 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 LSM10Q969L4 123 aaKnown RBP0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 LINC00312Q9Y6C7 94 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 SERP1Q9Y6X1 66 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 GOLGA3Q08378 1498 aa0.35□□□□□ -2.35
RNU6-28P-201ENST00000362378 SPAARA0A1B0GVQ0 90 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 SIX6O95475 246 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 BTG2P78543 158 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 Q5VV11 94 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 C12orf73Q69YU5 71 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 TTC28Q96AY4 2481 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 CACNA1HO95180 2353 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 BCL9LQ86UU0 1499 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 MBD5Q9P267 1494 aa0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.36
RNU6-28P-201ENST00000362378 NWD2Q9ULI1 1742 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 ANK2Q01484 3957 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 MEIG1Q5JSS6 88 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 Q8N8P6 123 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 NAA60Q9H7X0 242 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 FOCADQ5VW36 1801 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 ZMYM4Q5VZL5 1548 aa0.33□□□□□ -2.36
RNU6-28P-201ENST00000362378 TRAV1-2A0A0B4J238 106 aa0.32□□□□□ -2.36
RNU6-28P-201ENST00000362378 PIGBOS1A0A0B4J2F0 54 aa0.32□□□□□ -2.36
RNU6-28P-201ENST00000362378 HCG22E2RYF7 251 aa0.32□□□□□ -2.36
RNU6-28P-201ENST00000362378 GCHFRP30047 84 aa0.32□□□□□ -2.36
RNU6-28P-201ENST00000362378 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.32□□□□□ -2.36
RNU6-28P-201ENST00000362378 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
RNU6-28P-201ENST00000362378 TRAV13-2A0A0B4J235 113 aa0.31□□□□□ -2.36
RNU6-28P-201ENST00000362378 G3V318 75 aa0.31□□□□□ -2.36
RNU6-28P-201ENST00000362378 COX6A2Q02221 97 aa0.31□□□□□ -2.36
RNU6-28P-201ENST00000362378 NAIPQ13075 1403 aa0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 TPRP12270 2363 aaKnown RBP0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 FGF7P21781 194 aa0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 RBM3P98179 157 aaKnown RBP0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 BAGE3Q86Y29 109 aa0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 PIEZO1Q92508 2521 aa0.3□□□□□ -2.36
RNU6-28P-201ENST00000362378 EFCAB10A6NFE3 127 aa0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 CCL18P55774 89 aa0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 SARNPP82979 210 aaKnown RBP0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 IFT172Q9UG01 1749 aa0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 LRP1Q07954 4544 aaKnown RBP0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 ABCA12Q86UK0 2595 aa0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 MYO7AQ13402 2215 aa0.29□□□□□ -2.36
RNU6-28P-201ENST00000362378 CADP27708 2225 aa0.28□□□□□ -2.36
RNU6-28P-201ENST00000362378 LOC100130705A0A1B0GUX0 176 aa0.28□□□□□ -2.36
RNU6-28P-201ENST00000362378 SMIM6P0DI80 62 aa0.28□□□□□ -2.36
RNU6-28P-201ENST00000362378 Q56UQ5 140 aa0.28□□□□□ -2.36
RNU6-28P-201ENST00000362378 POLQO75417 2590 aa0.28□□□□□ -2.37
RNU6-28P-201ENST00000362378 MYH9P35579 1960 aaKnown RBP0.27□□□□□ -2.37
RNU6-28P-201ENST00000362378 DOCK11Q5JSL3 2073 aa0.27□□□□□ -2.37
RNU6-28P-201ENST00000362378 RPL13AP3Q6NVV1 102 aa0.27□□□□□ -2.37
RNU6-28P-201ENST00000362378 AQP10Q96PS8 301 aa0.27□□□□□ -2.37
RNU6-28P-201ENST00000362378 PRDM2Q13029 1718 aa0.27□□□□□ -2.37
RNU6-28P-201ENST00000362378 ARAP2Q8WZ64 1704 aa0.27□□□□□ -2.37
RNU6-28P-201ENST00000362378 PIN1P1O15428 100 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 PPP1R17O96001 155 aa0.26□□□□□ -2.37
RNU6-28P-201ENST00000362378 Q5BKY6 102 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms