RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 H7C1H1 209 aa15.5■□□□□ 0.07
HOXA4-201ENST00000360046 M0QY20 66 aa15.5■□□□□ 0.07
HOXA4-201ENST00000360046 CIDEAO60543 219 aa15.5■□□□□ 0.07
HOXA4-201ENST00000360046 OR10J3Q5JRS4 329 aa15.5■□□□□ 0.07
HOXA4-201ENST00000360046 NRACQ8N912 160 aa15.5■□□□□ 0.07
HOXA4-201ENST00000360046 LAMTOR2Q9Y2Q5 125 aa15.5■□□□□ 0.07
HOXA4-201ENST00000360046 NHLRC4P0CG21 123 aaPredicted RBP15.49■□□□□ 0.07
HOXA4-201ENST00000360046 BAGE3Q86Y29 109 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 DNAH9Q9NYC9 4486 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 PRKDCP78527 4128 aaKnown RBP15.48■□□□□ 0.07
HOXA4-201ENST00000360046 LOC389332A0A1B0GUA5 103 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 PPP1R17O96001 155 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 P0DMU3 169 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 FAM231AP0DMU4 169 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 FAM231CP0DMU5 169 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 OR10D4PQ8NGN7 298 aa15.48■□□□□ 0.07
HOXA4-201ENST00000360046 FHL2Q14192 279 aa15.47■□□□□ 0.07
HOXA4-201ENST00000360046 MAP1LC3AQ9H492 121 aa15.47■□□□□ 0.07
HOXA4-201ENST00000360046 ATP5G1P05496 136 aa15.46■□□□□ 0.07
HOXA4-201ENST00000360046 Q0VG73 95 aa15.46■□□□□ 0.07
HOXA4-201ENST00000360046 EDA2RQ9HAV5 297 aa15.46■□□□□ 0.07
HOXA4-201ENST00000360046 K7EQD1 137 aa15.46■□□□□ 0.06
HOXA4-201ENST00000360046 C12orf74Q32Q52 190 aa15.46■□□□□ 0.06
HOXA4-201ENST00000360046 SLC25A29Q8N8R3 303 aa15.46■□□□□ 0.06
HOXA4-201ENST00000360046 STAB2Q8WWQ8 2551 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 FABP4P15090 132 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 HTN3P15516 51 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 PYY3Q5JQD4 70 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 C11orf45Q8TAV5 145 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 HIST1H2BLQ99880 126 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 ST20Q9HBF5 79 aa15.45■□□□□ 0.06
HOXA4-201ENST00000360046 SUMO2P61956 95 aaKnown RBP15.44■□□□□ 0.06
HOXA4-201ENST00000360046 PACRGQ96M98 296 aaPredicted RBP15.44■□□□□ 0.06
HOXA4-201ENST00000360046 PRSS3P2Q8NHM4 247 aa15.43■□□□□ 0.06
HOXA4-201ENST00000360046 C20orf78Q9BR46 151 aa15.43■□□□□ 0.06
HOXA4-201ENST00000360046 Q9UF83 564 aa15.43■□□□□ 0.06
HOXA4-201ENST00000360046 HHLA3Q9XRX5 114 aa15.43■□□□□ 0.06
HOXA4-201ENST00000360046 TRBV6-4A0A1B0GX49 114 aa15.43■□□□□ 0.06
HOXA4-201ENST00000360046 IFI27P40305 119 aaPredicted RBP15.43■□□□□ 0.06
HOXA4-201ENST00000360046 TNFRSF18Q9Y5U5 241 aa15.43■□□□□ 0.06
HOXA4-201ENST00000360046 F5H768 121 aa15.42■□□□□ 0.06
HOXA4-201ENST00000360046 NANOS2P60321 138 aaKnown RBP15.42■□□□□ 0.06
HOXA4-201ENST00000360046 RNASEKQ6P5S7 137 aaKnown RBP15.42■□□□□ 0.06
HOXA4-201ENST00000360046 NEXN-AS1Q8NBZ9 246 aa15.42■□□□□ 0.06
HOXA4-201ENST00000360046 TMEM18Q96B42 140 aa15.42■□□□□ 0.06
HOXA4-201ENST00000360046 SERF1AO75920 110 aa15.41■□□□□ 0.06
HOXA4-201ENST00000360046 RHOHQ15669 191 aa15.41■□□□□ 0.06
HOXA4-201ENST00000360046 PDZD11Q5EBL8 140 aa15.41■□□□□ 0.06
HOXA4-201ENST00000360046 Q6ZTC4 211 aa15.41■□□□□ 0.06
HOXA4-201ENST00000360046 TRBV6-5A0A0K0K1A5 114 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 SDHAF1A6NFY7 115 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 PMCHP20382 165 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 CTAG1AP78358 180 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 FA2HQ7L5A8 372 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 NIT1Q86X76 327 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 PRADC1Q9BSG0 188 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 SMIM2Q9BVW6 85 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 PRO0255Q9UI72 69 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 TRBV10-1A0A0K0K1A3 114 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 DNAJC30Q96LL9 226 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 TMEM70Q9BUB7 260 aa15.4■□□□□ 0.06
HOXA4-201ENST00000360046 CRYBA4P53673 196 aa15.39■□□□□ 0.05
HOXA4-201ENST00000360046 JOSD1Q15040 202 aaPredicted RBP15.39■□□□□ 0.05
HOXA4-201ENST00000360046 NEGR1Q7Z3B1 354 aa15.39■□□□□ 0.05
HOXA4-201ENST00000360046 NXT2Q9NPJ8 142 aaKnown RBP15.39■□□□□ 0.05
HOXA4-201ENST00000360046 LOC100131303A0A0U1RQF7 123 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 PRSS47A8MTI9 375 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 LINC00614P0C842 121 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 LINC00310P59036 64 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 RPL36AP83881 106 aaKnown RBP15.38■□□□□ 0.05
HOXA4-201ENST00000360046 Q8N8P6 123 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 ZNRF2Q8NHG8 242 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 RPL36ALQ969Q0 106 aaKnown RBP15.38■□□□□ 0.05
HOXA4-201ENST00000360046 URB1-AS1Q96HZ7 61 aa15.38■□□□□ 0.05
HOXA4-201ENST00000360046 GAGE12JA6NER3 117 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 GAGE1Q13065 139 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 GAGE4Q13068 117 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 GAGE5Q13069 117 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 GAGE13Q4V321 117 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 TRBV7-3A0A075B6L6 115 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 PAX4O43316 350 aa15.37■□□□□ 0.05
HOXA4-201ENST00000360046 POLR2KP53803 58 aaKnown RBP15.37■□□□□ 0.05
HOXA4-201ENST00000360046 A0A0J9YY99 117 aa15.36■□□□□ 0.05
HOXA4-201ENST00000360046 NUPR1O60356 82 aa15.36■□□□□ 0.05
HOXA4-201ENST00000360046 AP5S1Q9NUS5 200 aa15.36■□□□□ 0.05
HOXA4-201ENST00000360046 IGLV2-18A0A075B6J9 118 aa15.35■□□□□ 0.05
HOXA4-201ENST00000360046 TRAV26-1A0A087WT03 109 aa15.35■□□□□ 0.05
HOXA4-201ENST00000360046 VCYO14598 125 aa15.35■□□□□ 0.05
HOXA4-201ENST00000360046 RPL32P62910 135 aaKnown RBP15.35■□□□□ 0.05
HOXA4-201ENST00000360046 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
HOXA4-201ENST00000360046 CHCHD1Q96BP2 118 aaKnown RBP15.35■□□□□ 0.05
HOXA4-201ENST00000360046 TRBV27A0A0K0K1C4 114 aa15.34■□□□□ 0.05
HOXA4-201ENST00000360046 TCAPO15273 167 aa15.34■□□□□ 0.05
HOXA4-201ENST00000360046 HSBP1O75506 76 aa15.34■□□□□ 0.05
HOXA4-201ENST00000360046 GYPEP15421 78 aa15.34■□□□□ 0.05
HOXA4-201ENST00000360046 PHLDA1Q8WV24 401 aaPredicted RBP15.34■□□□□ 0.05
HOXA4-201ENST00000360046 KIR2DL4Q99706 377 aa15.34■□□□□ 0.05
HOXA4-201ENST00000360046 IGHV3-38A0A0C4DH36 116 aa15.33■□□□□ 0.04
HOXA4-201ENST00000360046 VSIG2Q96IQ7 327 aa15.33■□□□□ 0.04
HOXA4-201ENST00000360046 DEFB131BA0A096LNP1 70 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms