RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TCL1BO95988 128 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 LINC00032P0C843 101 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 RNASE2P10153 161 aaKnown RBP1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 ZNF90Q03938 601 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 SLC48A1Q6P1K1 146 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 LCA10Q71F78 164 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 SLC22A24Q8N4F4 322 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 TOMM5Q8N4H5 51 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 TCTEX1D1Q8N7M0 179 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 TMEM204Q9BSN7 226 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 ANKRD17O75179 2603 aaKnown RBP1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 SLC25A14O95258 325 aaPredicted RBP1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 MT-ND6P03923 174 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 TSPEAR-AS2P59090 65 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 TMEM258P61165 79 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 REG3AQ06141 175 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 KRTAP19-2Q3LHN2 52 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 SPATA45Q537H7 98 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 PSMG4Q5JS54 123 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 ZNF833PQ6ZTB9 187 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 KRTAP1-5Q9BYS1 174 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 V9GY05 133 aa1.04□□□□□ -2.24
SMARCAD1-202ENST00000359052 PLXNB1O43157 2135 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 TRBV25-1A0A075B6N4 114 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 IGKV3D-11A0A0A0MRZ8 115 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 C16orf90A8MZG2 172 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 UQCRQO14949 82 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 CCL16O15467 120 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 FSHBP01225 129 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 SSR2P43308 183 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 C1orf195Q5TG92 126 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 Q8NAQ8 132 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 IFI27L1Q96BM0 104 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 JPT2Q9H910 190 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 WASHC3Q9Y3C0 194 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 A0A0B4J2C4 111 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 TRGV8A0A0C4DH27 118 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 FAM168BA1KXE4 195 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 C3orf84H3BNL1 204 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 IGHV3-33P01772 117 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 GYPAP02724 150 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 PPIBP23284 216 aaKnown RBP1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 FUSP35637 526 aaKnown RBP eCLIP1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 SH2D6Q7Z4S9 175 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 ASF1BQ9NVP2 202 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 CKLFQ9UBR5 152 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 USP9XQ93008 2570 aaPredicted RBP1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 ATRXP46100 2492 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 A0A0J9YY99 117 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 EEF1E1-BLOC1S5C9J1V9 151 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 H7C423 109 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 TMEM61Q8N0U2 210 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 MAP1BP46821 2468 aaKnown RBP1.03□□□□□ -2.24
SMARCAD1-202ENST00000359052 RBAKDNA6NC62 111 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 OOSP1A8MZH6 123 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 AGPAT2O15120 278 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGKV1-16P04430 117 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 INAFM2P0DMQ5 153 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 RPL27AP46776 148 aaKnown RBP1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 ZNF137PP52743 207 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 CYCSP99999 105 aaKnown RBP1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 IBA57Q5T440 356 aaKnown RBP1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 SLC25A29Q8N8R3 303 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 C6orf106Q9H6K1 298 aaPredicted RBP1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 TRAPPC2LQ9UL33 140 aa1.03□□□□□ -2.25
SMARCAD1-202ENST00000359052 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 NBEAL1Q6ZS30 2694 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGHV7-4-1A0A0J9YVY3 117 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 LYRM9A8MSI8 78 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 C9JAW5 83 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 SSSCA1O60232 199 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 IGKV3-11P04433 115 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 MMP7P09237 267 aaPredicted RBP1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 CATR1Q13166 79 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 PYDC2Q56P42 97 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 SPINK14Q6IE38 97 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 LCN15Q6UWW0 184 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 CCL13Q99616 98 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 PRADC1Q9BSG0 188 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 HDHD3Q9BSH5 251 aaPredicted RBP1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 GTSF1LQ9H1H1 148 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 HIGD1AQ9Y241 93 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 FAM215AQ9Y5M1 114 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 V9GYQ6 96 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 ZNF407Q9C0G0 2248 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 TMEM235A6NFC5 223 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 A6NIN4 97 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 C17orf51A8MQB3 221 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 NPFFO15130 113 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 GAS8-AS1O95177 125 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 PECRQ9BY49 303 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 MRPL35Q9NZE8 188 aaKnown RBP1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 A0A1B0GU33 70 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 hDV103S1A0JD37 113 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 GCHFRP30047 84 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 Q5VV11 94 aa1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 C11orf68Q9H3H3 251 aaKnown RBP1.02□□□□□ -2.25
SMARCAD1-202ENST00000359052 C10orf128Q5T292 105 aa1.01□□□□□ -2.25
SMARCAD1-202ENST00000359052 C12orf54Q6X4T0 127 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms