RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 J3QLI3 93 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 DEFB1P60022 68 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 PROK2Q9HC23 129 aa8.5□□□□□ -1.05
GTF3C1-201ENST00000356183 IGHV4-30-2A0A087WSY4 118 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 K7ERS5 55 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 CCL18P55774 89 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 PATE2Q6UY27 113 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 NACAE9PAV3 2078 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 DENND4CQ5VZ89 1909 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 CTRLP40313 264 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 AJUBAQ96IF1 538 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 CXCL5P42830 114 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 SPANXB1Q9NS25 103 aaPredicted RBP8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 ARFGEF3Q5TH69 2177 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 FRMPD3Q5JV73 1810 aa8.49□□□□□ -1.05
GTF3C1-201ENST00000356183 SPART-AS1P0CW21 52 aa8.48□□□□□ -1.05
GTF3C1-201ENST00000356183 C1orf195Q5TG92 126 aa8.48□□□□□ -1.05
GTF3C1-201ENST00000356183 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
GTF3C1-201ENST00000356183 ARHGAP21Q5T5U3 1957 aa8.48□□□□□ -1.05
GTF3C1-201ENST00000356183 A6NED7 52 aa8.48□□□□□ -1.05
GTF3C1-201ENST00000356183 VPREB3Q9UKI3 123 aa8.48□□□□□ -1.05
GTF3C1-201ENST00000356183 P0DMU3 169 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 FAM231AP0DMU4 169 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 FAM231CP0DMU5 169 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 CTSZQ9UBR2 303 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 TANC1Q9C0D5 1861 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 C9orf66Q5T8R8 295 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 A0A096LNI7 61 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 K7EIM0 57 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 SIRPDQ9H106 197 aa8.47□□□□□ -1.05
GTF3C1-201ENST00000356183 A0A0J9YXY3 114 aa8.46□□□□□ -1.05
GTF3C1-201ENST00000356183 IGLV1-44P01699 117 aa8.46□□□□□ -1.05
GTF3C1-201ENST00000356183 CCDC179H3BU77 68 aa8.46□□□□□ -1.06
GTF3C1-201ENST00000356183 IGHV4-38-2P0DP08 117 aa8.46□□□□□ -1.06
GTF3C1-201ENST00000356183 MDFICQ9P1T7 246 aa8.46□□□□□ -1.06
GTF3C1-201ENST00000356183 RNF138Q8WVD3 245 aa8.46□□□□□ -1.06
GTF3C1-201ENST00000356183 FAM167A-AS1Q96KT0 104 aa8.46□□□□□ -1.06
GTF3C1-201ENST00000356183 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
GTF3C1-201ENST00000356183 J3QKU1 62 aa8.45□□□□□ -1.06
GTF3C1-201ENST00000356183 CTSGP08311 255 aa8.45□□□□□ -1.06
GTF3C1-201ENST00000356183 IGLV11-55A0A075B6I3 123 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 TIMM17BO60830 172 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 PDE6GP18545 87 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 ODF3L1Q8IXM7 274 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 CENPVL3A0A0U1RRI6 287 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 C11orf53Q8IXP5 236 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 PRR4Q16378 134 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 TP53TG3Q9ULZ0 132 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 IGKV1-17P01599 117 aa8.44□□□□□ -1.06
GTF3C1-201ENST00000356183 KRTAP27-1Q3LI81 207 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 NDUFA7O95182 113 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 EP400Q96L91 3159 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 PLA2G5P39877 138 aa8.43□□□□□ -1.06
GTF3C1-201ENST00000356183 IGHV4-30-4P0DP06 118 aa8.42□□□□□ -1.06
GTF3C1-201ENST00000356183 IGHV4-31P0DP07 118 aa8.42□□□□□ -1.06
GTF3C1-201ENST00000356183 BLCAPP62952 87 aa8.42□□□□□ -1.06
GTF3C1-201ENST00000356183 IGLV2-14P01704 120 aa8.42□□□□□ -1.06
GTF3C1-201ENST00000356183 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
GTF3C1-201ENST00000356183 C3orf84H3BNL1 204 aa8.42□□□□□ -1.06
GTF3C1-201ENST00000356183 TRBV6-1A0A0K0K1D8 114 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 PLXNB3Q9ULL4 1909 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 DYSFO75923 2080 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 K7ENP7 123 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 WT1P19544 449 aaPredicted RBP8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 DEFB135Q30KP9 77 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 C5orf56Q8N8D9 126 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 TRIAP1O43715 76 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 C19orf71A6NCJ1 209 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 KAAG1Q9UBP8 84 aa8.41□□□□□ -1.06
GTF3C1-201ENST00000356183 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 FAM19A1Q7Z5A9 133 aa8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 FREM1Q5H8C1 2179 aa8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 NUP210Q8TEM1 1887 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-201ENST00000356183 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.07
GTF3C1-201ENST00000356183 IGLV2-8P01709 118 aa8.4□□□□□ -1.07
GTF3C1-201ENST00000356183 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.07
GTF3C1-201ENST00000356183 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 TRBV27A0A0K0K1C4 114 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 ATP5EP56381 51 aaPredicted RBP8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 E7EUB6 86 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 M0QXV9 152 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 C20orf203Q8NBC4 194 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 KIAA1671Q9BY89 1806 aa8.39□□□□□ -1.07
GTF3C1-201ENST00000356183 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms