RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MRPL23Q16540 153 aaKnown RBP12.98□□□□□ -0.33
NPAS3-202ENST00000356141 IGHV1OR15-1A0A075B7D0 117 aa12.97□□□□□ -0.33
NPAS3-202ENST00000356141 F8WDY8 70 aa12.97□□□□□ -0.33
NPAS3-202ENST00000356141 CRXO43186 299 aaPredicted RBP12.97□□□□□ -0.33
NPAS3-202ENST00000356141 SMIM17P0DL12 118 aa12.97□□□□□ -0.33
NPAS3-202ENST00000356141 RASL10AQ92737 203 aa12.97□□□□□ -0.33
NPAS3-202ENST00000356141 ZNF256Q9Y2P7 627 aaPredicted RBP12.97□□□□□ -0.33
NPAS3-202ENST00000356141 IGHV3-16A0A0C4DH30 117 aa12.96□□□□□ -0.33
NPAS3-202ENST00000356141 HSD52Q0P140 79 aa12.96□□□□□ -0.33
NPAS3-202ENST00000356141 ZNF56Q15929 161 aa12.96□□□□□ -0.33
NPAS3-202ENST00000356141 ZNF876PQ49A33 203 aa12.96□□□□□ -0.33
NPAS3-202ENST00000356141 H3BUT2 72 aa12.96□□□□□ -0.34
NPAS3-202ENST00000356141 HBDP02042 147 aa12.96□□□□□ -0.34
NPAS3-202ENST00000356141 LINC01587Q99440 93 aa12.96□□□□□ -0.34
NPAS3-202ENST00000356141 STAB1Q9NY15 2570 aa12.96□□□□□ -0.34
NPAS3-202ENST00000356141 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 TSPAN13O95857 204 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 P0DMU3 169 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 DPH3P1Q9H4G8 78 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 DKK2Q9UBU2 259 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 HSPB8Q9UJY1 196 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 UFSP1Q6NVU6 142 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 SLC25A34Q6PIV7 304 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 Q9UF83 564 aa12.95□□□□□ -0.34
NPAS3-202ENST00000356141 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
NPAS3-202ENST00000356141 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
NPAS3-202ENST00000356141 DUSP14O95147 198 aaKnown RBP12.94□□□□□ -0.34
NPAS3-202ENST00000356141 MRAP2Q96G30 205 aa12.94□□□□□ -0.34
NPAS3-202ENST00000356141 PRSS1P07477 247 aa12.94□□□□□ -0.34
NPAS3-202ENST00000356141 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
NPAS3-202ENST00000356141 GAGE12HA6NDE8 117 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 ADARB2-AS1A8MUL3 147 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 STHQ8IWL8 128 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 FBN1P35555 2871 aaKnown RBP12.93□□□□□ -0.34
NPAS3-202ENST00000356141 PF4P02776 101 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 FHL3Q13643 280 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 SUMO4Q6EEV6 95 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 SCRT2Q9NQ03 307 aa12.93□□□□□ -0.34
NPAS3-202ENST00000356141 ZC2HC1BQ5TFG8 222 aa12.92□□□□□ -0.34
NPAS3-202ENST00000356141 RAB37Q96AX2 223 aa12.92□□□□□ -0.34
NPAS3-202ENST00000356141 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
NPAS3-202ENST00000356141 MRPL16Q9NX20 251 aaKnown RBP12.92□□□□□ -0.34
NPAS3-202ENST00000356141 OR11H12B2RN74 326 aa12.91□□□□□ -0.34
NPAS3-202ENST00000356141 RPL32P62910 135 aaKnown RBP12.91□□□□□ -0.34
NPAS3-202ENST00000356141 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
NPAS3-202ENST00000356141 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.34
NPAS3-202ENST00000356141 PKD1L1Q8TDX9 2849 aa12.9□□□□□ -0.34
NPAS3-202ENST00000356141 K7EP34 96 aa12.9□□□□□ -0.34
NPAS3-202ENST00000356141 ST20Q9HBF5 79 aa12.9□□□□□ -0.34
NPAS3-202ENST00000356141 IGLV2-18A0A075B6J9 118 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 Q8N8P6 123 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 TTTY13Q9BZ97 58 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 EMP1P54849 157 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
NPAS3-202ENST00000356141 LINC00315P59091 139 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 SMIM2Q9BVW6 85 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 C16orf95Q9H693 158 aa12.89□□□□□ -0.35
NPAS3-202ENST00000356141 NXT2Q9NPJ8 142 aaKnown RBP12.89□□□□□ -0.35
NPAS3-202ENST00000356141 LAGE3Q14657 143 aa12.88□□□□□ -0.35
NPAS3-202ENST00000356141 SPCS1Q9Y6A9 102 aa12.88□□□□□ -0.35
NPAS3-202ENST00000356141 RPL39P62891 51 aaKnown RBP12.88□□□□□ -0.35
NPAS3-202ENST00000356141 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
NPAS3-202ENST00000356141 C1orf43Q9BWL3 253 aa12.88□□□□□ -0.35
NPAS3-202ENST00000356141 KIF25-AS1Q9Y6Z4 181 aa12.88□□□□□ -0.35
NPAS3-202ENST00000356141 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
NPAS3-202ENST00000356141 FCER1GP30273 86 aa12.87□□□□□ -0.35
NPAS3-202ENST00000356141 RNF183Q96D59 192 aa12.87□□□□□ -0.35
NPAS3-202ENST00000356141 C9orf85Q96MD7 179 aa12.87□□□□□ -0.35
NPAS3-202ENST00000356141 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
NPAS3-202ENST00000356141 B5MCH6 92 aa12.86□□□□□ -0.35
NPAS3-202ENST00000356141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.86□□□□□ -0.35
NPAS3-202ENST00000356141 CRYGDP07320 174 aa12.85□□□□□ -0.35
NPAS3-202ENST00000356141 NMUP48645 174 aa12.85□□□□□ -0.35
NPAS3-202ENST00000356141 LINC01545Q5VT33 79 aa12.85□□□□□ -0.35
NPAS3-202ENST00000356141 Q6ZSN1 163 aa12.84□□□□□ -0.35
NPAS3-202ENST00000356141 IGHV3-38A0A0C4DH36 116 aa12.84□□□□□ -0.35
NPAS3-202ENST00000356141 SDHAF1A6NFY7 115 aa12.84□□□□□ -0.35
NPAS3-202ENST00000356141 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-202ENST00000356141 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-202ENST00000356141 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
NPAS3-202ENST00000356141 MTURNQ8N3F0 131 aa12.83□□□□□ -0.36
NPAS3-202ENST00000356141 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
NPAS3-202ENST00000356141 ODF3Q96PU9 254 aa12.83□□□□□ -0.36
NPAS3-202ENST00000356141 INSP01308 110 aa12.83□□□□□ -0.36
NPAS3-202ENST00000356141 LINC00482Q8N8I6 264 aa12.83□□□□□ -0.36
NPAS3-202ENST00000356141 TMEM97Q5BJF2 176 aa12.82□□□□□ -0.36
NPAS3-202ENST00000356141 GTSCR1Q86UQ5 136 aa12.82□□□□□ -0.36
NPAS3-202ENST00000356141 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
NPAS3-202ENST00000356141 TRGV11A0A075B6L2 103 aa12.82□□□□□ -0.36
NPAS3-202ENST00000356141 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
NPAS3-202ENST00000356141 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
NPAS3-202ENST00000356141 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
NPAS3-202ENST00000356141 C2orf66Q6UXQ4 117 aa12.81□□□□□ -0.36
NPAS3-202ENST00000356141 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
NPAS3-202ENST00000356141 COL6A5A8TX70 2615 aa12.81□□□□□ -0.36
NPAS3-202ENST00000356141 PCP2Q8IVA1 136 aa12.8□□□□□ -0.36
NPAS3-202ENST00000356141 MED14OSP0DP75 135 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 589.5 ms