RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
HTT-201ENST00000355072 C9orf106Q8NAJ2 232 aa6.25□□□□□ -1.41
HTT-201ENST00000355072 H3BUX3 64 aa6.25□□□□□ -1.41
HTT-201ENST00000355072 WFDC2Q14508 124 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 UBE2E2Q96LR5 201 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 TRAV12-2A0A075B6T6 113 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 C10orf55Q5SWW7 151 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 SPRR3Q9UBC9 169 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 Q6JHZ5 121 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 ANGP03950 147 aaKnown RBP6.24□□□□□ -1.41
HTT-201ENST00000355072 MSMBP08118 114 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 PCSK5Q92824 1860 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 MSRB2Q9Y3D2 182 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 NDPQ00604 133 aa6.24□□□□□ -1.41
HTT-201ENST00000355072 IGLV11-55A0A075B6I3 123 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 C17orf58Q2M2W7 97 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 BPY2O14599 106 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 IGKV1-39P01597 117 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 IGKV1D-39P04432 117 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 WDR86Q86TI4 376 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 RPP25Q9BUL9 199 aaKnown RBP6.23□□□□□ -1.41
HTT-201ENST00000355072 LINC00474Q9P2X8 69 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
HTT-201ENST00000355072 FXYD7P58549 80 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 SP5Q6BEB4 398 aaPredicted RBP6.23□□□□□ -1.41
HTT-201ENST00000355072 C20orf203Q8NBC4 194 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 CXCL6P80162 114 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
HTT-201ENST00000355072 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 S4R3C0 116 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 P0C879 139 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 TIRAPP58753 221 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 WI2-2373I1.2A0A1W2PRP0 233 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 LECT2O14960 151 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 MUC22E2RYF6 1773 aaPredicted RBP6.22□□□□□ -1.41
HTT-201ENST00000355072 NFE4Q86UQ8 179 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 ZMAT4Q9H898 229 aa6.22□□□□□ -1.41
HTT-201ENST00000355072 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.41
HTT-201ENST00000355072 A0A087WV48 116 aa6.21□□□□□ -1.41
HTT-201ENST00000355072 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.41
HTT-201ENST00000355072 SMIM9A6NGZ8 99 aa6.21□□□□□ -1.41
HTT-201ENST00000355072 GPHB5Q86YW7 130 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 MT-ATP8P03928 68 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 DEFB130BP0DP73 79 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 DEFB130AP0DP74 79 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 C11orf1Q9H5F2 150 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 UFSP1Q6NVU6 142 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 AJUBAQ96IF1 538 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 A6NED7 52 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 AGPAT4-IT1Q9H0P7 198 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 IL17DQ8TAD2 202 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 LIMD2Q9BT23 127 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 JMJD1CQ15652 2540 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 F5H768 121 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 FAM167A-AS1Q96KT0 104 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 I3L2K1 104 aa6.21□□□□□ -1.42
HTT-201ENST00000355072 TDRG1Q3Y452 100 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 WFDC12Q8WWY7 111 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 IGHV3-30P01768 117 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 IGHV3-30-5P0DP03 117 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 SPINK2P20155 84 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
HTT-201ENST00000355072 IGLC6P0CF74 106 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 C4orf3Q8WVX3 66 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 B9D2Q9BPU9 175 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 IGHV4-4A0A075B6R2 117 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 DKK4Q9UBT3 224 aa6.2□□□□□ -1.42
HTT-201ENST00000355072 COL4A4P53420 1690 aaPredicted RBP6.19□□□□□ -1.42
HTT-201ENST00000355072 TRAV23DV6A0A075B6W5 121 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 XCL1P47992 114 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 CAMK2N2Q96S95 79 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 ZFHX2Q9C0A1 2572 aaPredicted RBP6.19□□□□□ -1.42
HTT-201ENST00000355072 LINC01560Q8TB33 94 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 DEFB131AP59861 70 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 MIFP14174 115 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 COL4A5P29400 1685 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 HOXB4P17483 251 aaPredicted RBP6.19□□□□□ -1.42
HTT-201ENST00000355072 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 UBE2D3P61077 147 aa6.19□□□□□ -1.42
HTT-201ENST00000355072 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 A0A0G2JNJ9 132 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 Q9UFV3 132 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 IGHV3OR16-8A0A075B7F1 116 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 COX7BP24311 80 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 LOXP28300 417 aaPredicted RBP6.18□□□□□ -1.42
HTT-201ENST00000355072 Q8N9L7 120 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 TRBV7-7A0A0K0K1E9 115 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 K7EIM0 57 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 IGHV3-33P01772 117 aa6.18□□□□□ -1.42
HTT-201ENST00000355072 TRIAP1O43715 76 aa6.17□□□□□ -1.42
HTT-201ENST00000355072 RPL28P46779 137 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms