RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FA2HQ7L5A8 372 aa11.1□□□□□ -0.63
CTSA-202ENST00000354880 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
CTSA-202ENST00000354880 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
CTSA-202ENST00000354880 HSBP1O75506 76 aa11.09□□□□□ -0.63
CTSA-202ENST00000354880 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
CTSA-202ENST00000354880 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
CTSA-202ENST00000354880 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
CTSA-202ENST00000354880 IFITM10A6NMD0 228 aa11.09□□□□□ -0.63
CTSA-202ENST00000354880 PMCHP20382 165 aa11.09□□□□□ -0.63
CTSA-202ENST00000354880 TRBV6-5A0A0K0K1A5 114 aa11.08□□□□□ -0.64
CTSA-202ENST00000354880 Q8N8P6 123 aa11.08□□□□□ -0.64
CTSA-202ENST00000354880 MRAPQ8TCY5 172 aa11.08□□□□□ -0.64
CTSA-202ENST00000354880 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
CTSA-202ENST00000354880 HUWE1Q7Z6Z7 4374 aaKnown RBP11.08□□□□□ -0.64
CTSA-202ENST00000354880 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 P0DMU3 169 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 FABP4P15090 132 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 HIST1H2BLQ99880 126 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 CELA1Q9UNI1 258 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 AMTP48728 403 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 TM2D3Q9BRN9 247 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 TMEM70Q9BUB7 260 aa11.07□□□□□ -0.64
CTSA-202ENST00000354880 TRGV4A0A0C4DH28 118 aa11.06□□□□□ -0.64
CTSA-202ENST00000354880 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
CTSA-202ENST00000354880 POLR2KP53803 58 aaKnown RBP11.06□□□□□ -0.64
CTSA-202ENST00000354880 DAD1P61803 113 aa11.06□□□□□ -0.64
CTSA-202ENST00000354880 RPL32P62910 135 aaKnown RBP11.06□□□□□ -0.64
CTSA-202ENST00000354880 TEX48A0A1B0GUV7 120 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 K7EQD1 137 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 SLC25A29Q8N8R3 303 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
CTSA-202ENST00000354880 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 IGHV1-24A0A0C4DH33 117 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 FHL2Q14192 279 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 Q9UF83 564 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 TNFRSF18Q9Y5U5 241 aa11.05□□□□□ -0.64
CTSA-202ENST00000354880 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
CTSA-202ENST00000354880 TRBV27A0A0K0K1C4 114 aa11.04□□□□□ -0.64
CTSA-202ENST00000354880 VCYO14598 125 aa11.04□□□□□ -0.64
CTSA-202ENST00000354880 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
CTSA-202ENST00000354880 DNAJC30Q96LL9 226 aa11.04□□□□□ -0.64
CTSA-202ENST00000354880 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
CTSA-202ENST00000354880 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
CTSA-202ENST00000354880 TCAPO15273 167 aa11.03□□□□□ -0.64
CTSA-202ENST00000354880 AKR1D1P51857 326 aa11.02□□□□□ -0.64
CTSA-202ENST00000354880 LAGE3Q14657 143 aa11.02□□□□□ -0.64
CTSA-202ENST00000354880 NEGR1Q7Z3B1 354 aa11.02□□□□□ -0.64
CTSA-202ENST00000354880 KIR2DL4Q99706 377 aa11.02□□□□□ -0.64
CTSA-202ENST00000354880 K7EMI3 77 aa11.02□□□□□ -0.65
CTSA-202ENST00000354880 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.65
CTSA-202ENST00000354880 ATP5G1P05496 136 aa11.01□□□□□ -0.65
CTSA-202ENST00000354880 RHOHQ15669 191 aa11.01□□□□□ -0.65
CTSA-202ENST00000354880 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
CTSA-202ENST00000354880 HHLA3Q9XRX5 114 aa11.01□□□□□ -0.65
CTSA-202ENST00000354880 TRBV7-3A0A075B6L6 115 aa11□□□□□ -0.65
CTSA-202ENST00000354880 A0A096LNJ9 63 aa11□□□□□ -0.65
CTSA-202ENST00000354880 A0A0J9YWU9 116 aa11□□□□□ -0.65
CTSA-202ENST00000354880 RPL36AP83881 106 aaKnown RBP11□□□□□ -0.65
CTSA-202ENST00000354880 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
CTSA-202ENST00000354880 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
CTSA-202ENST00000354880 RPL36ALQ969Q0 106 aaKnown RBP11□□□□□ -0.65
CTSA-202ENST00000354880 I3L3M4 83 aa11□□□□□ -0.65
CTSA-202ENST00000354880 HBDP02042 147 aa11□□□□□ -0.65
CTSA-202ENST00000354880 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
CTSA-202ENST00000354880 FCER1GP30273 86 aa10.99□□□□□ -0.65
CTSA-202ENST00000354880 DEFB104AQ8WTQ1 72 aa10.99□□□□□ -0.65
CTSA-202ENST00000354880 B9D2Q9BPU9 175 aa10.99□□□□□ -0.65
CTSA-202ENST00000354880 PRO0255Q9UI72 69 aa10.99□□□□□ -0.65
CTSA-202ENST00000354880 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 NUDT3O95989 172 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 C12orf74Q32Q52 190 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 COL7A1Q02388 2944 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 GAGE12JA6NER3 117 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 BTF3P20290 206 aaKnown RBP10.98□□□□□ -0.65
CTSA-202ENST00000354880 CRYBA4P53673 196 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 GAGE1Q13065 139 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 GAGE4Q13068 117 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 GAGE5Q13069 117 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 GAGE13Q4V321 117 aa10.98□□□□□ -0.65
CTSA-202ENST00000354880 LOC100131303A0A0U1RQF7 123 aa10.97□□□□□ -0.65
CTSA-202ENST00000354880 TSHBP01222 138 aa10.97□□□□□ -0.65
CTSA-202ENST00000354880 PHLDA1Q8WV24 401 aaPredicted RBP10.97□□□□□ -0.65
CTSA-202ENST00000354880 PRKDCP78527 4128 aaKnown RBP10.97□□□□□ -0.65
CTSA-202ENST00000354880 MEGF8Q7Z7M0 2845 aa10.97□□□□□ -0.65
CTSA-202ENST00000354880 UBE2D3P61077 147 aa10.96□□□□□ -0.65
CTSA-202ENST00000354880 UBE2D2P62837 147 aa10.96□□□□□ -0.65
CTSA-202ENST00000354880 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.65
CTSA-202ENST00000354880 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.65
CTSA-202ENST00000354880 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.65
CTSA-202ENST00000354880 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
CTSA-202ENST00000354880 F5H768 121 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms