RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PIEZO1Q92508 2521 aa18.08■□□□□ 0.49
CPNE1-202ENST00000352393 I3L3M4 83 aa18.08■□□□□ 0.49
CPNE1-202ENST00000352393 ZNF22P17026 224 aaPredicted RBP18.08■□□□□ 0.49
CPNE1-202ENST00000352393 TRBV20-1A0A075B6N2 111 aa18.07■□□□□ 0.48
CPNE1-202ENST00000352393 GATA3P23771 443 aa18.07■□□□□ 0.48
CPNE1-202ENST00000352393 PRO1854Q9UHT4 67 aa18.07■□□□□ 0.48
CPNE1-202ENST00000352393 IGLV4-3A0A075B6K6 122 aa18.07■□□□□ 0.48
CPNE1-202ENST00000352393 ZNF418Q8TF45 676 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-202ENST00000352393 TRGV11A0A075B6L2 103 aa18.06■□□□□ 0.48
CPNE1-202ENST00000352393 RHODO00212 210 aa18.06■□□□□ 0.48
CPNE1-202ENST00000352393 SYNJ2BPP57105 145 aa18.06■□□□□ 0.48
CPNE1-202ENST00000352393 SBSPONQ8IVN8 264 aa18.06■□□□□ 0.48
CPNE1-202ENST00000352393 EDA2RQ9HAV5 297 aa18.05■□□□□ 0.48
CPNE1-202ENST00000352393 EIF4EBP3O60516 100 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-202ENST00000352393 TEN1Q86WV5 123 aa18.03■□□□□ 0.48
CPNE1-202ENST00000352393 PTH2Q96A98 100 aa18.03■□□□□ 0.48
CPNE1-202ENST00000352393 PKD1L2Q7Z442 2459 aa18.03■□□□□ 0.48
CPNE1-202ENST00000352393 A0A0J9YXV3 536 aa18.02■□□□□ 0.48
CPNE1-202ENST00000352393 A4D1N5 150 aa18.02■□□□□ 0.48
CPNE1-202ENST00000352393 RBMY1A1P0DJD3 496 aaKnown RBP18.02■□□□□ 0.48
CPNE1-202ENST00000352393 RBMY1CP0DJD4 496 aa18.02■□□□□ 0.48
CPNE1-202ENST00000352393 RBMY1FQ15415 496 aaKnown RBP18.02■□□□□ 0.48
CPNE1-202ENST00000352393 CDIP1Q9H305 208 aa18.02■□□□□ 0.48
CPNE1-202ENST00000352393 DOPEY2Q9Y3R5 2298 aa18.02■□□□□ 0.48
CPNE1-202ENST00000352393 PPDPFLQ8WWR9 84 aa18.01■□□□□ 0.47
CPNE1-202ENST00000352393 CARD19Q96LW7 228 aa18.01■□□□□ 0.47
CPNE1-202ENST00000352393 VCX2Q9H322 139 aa18.01■□□□□ 0.47
CPNE1-202ENST00000352393 CSPG4Q6UVK1 2322 aa18.01■□□□□ 0.47
CPNE1-202ENST00000352393 TMEM263Q8WUH6 116 aaKnown RBP18.01■□□□□ 0.47
CPNE1-202ENST00000352393 IGHV3-64A0A075B6Q5 118 aa18■□□□□ 0.47
CPNE1-202ENST00000352393 A0A0B4J2C4 111 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 HOXD3P31249 432 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-202ENST00000352393 FHL3Q13643 280 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 FAM104AQ969W3 186 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 PYGO1Q9Y3Y4 419 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 IGHV3-33P01772 117 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 DUX5Q96PT3 197 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 SPG11Q96JI7 2443 aa17.99■□□□□ 0.47
CPNE1-202ENST00000352393 COL12A1Q99715 3063 aa17.98■□□□□ 0.47
CPNE1-202ENST00000352393 DSCR9P59020 149 aa17.98■□□□□ 0.47
CPNE1-202ENST00000352393 CACNA1AO00555 2505 aa17.98■□□□□ 0.47
CPNE1-202ENST00000352393 TRAV2A0A0B4J234 112 aa17.98■□□□□ 0.47
CPNE1-202ENST00000352393 A8MWV9 139 aa17.98■□□□□ 0.47
CPNE1-202ENST00000352393 M0R2P5 195 aa17.98■□□□□ 0.47
CPNE1-202ENST00000352393 ELANEP08246 267 aa17.97■□□□□ 0.47
CPNE1-202ENST00000352393 LINC01356Q8N9X3 169 aa17.97■□□□□ 0.47
CPNE1-202ENST00000352393 TGFAP01135 160 aa17.96■□□□□ 0.47
CPNE1-202ENST00000352393 MUSTN1Q8IVN3 82 aa17.96■□□□□ 0.47
CPNE1-202ENST00000352393 CELSR2Q9HCU4 2923 aa17.96■□□□□ 0.47
CPNE1-202ENST00000352393 SCGB1C2P0DMR2 95 aa17.96■□□□□ 0.47
CPNE1-202ENST00000352393 A0A0J9YXY3 114 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 A8MTW9 85 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 CIDEAO60543 219 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 CD28P10747 220 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 UBE2E2Q96LR5 201 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 CRYBA4P53673 196 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 MRPS36P82909 103 aaKnown RBP17.95■□□□□ 0.46
CPNE1-202ENST00000352393 TCTEX1D4Q5JR98 221 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 RAX2Q96IS3 184 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 VPREB3Q9UKI3 123 aa17.95■□□□□ 0.46
CPNE1-202ENST00000352393 A0A096LNT2 108 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 KNCNA6PVL3 124 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 IGHV3-30-3P0DP02 117 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 ANKRD29Q8N6D5 301 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 NRGNQ92686 78 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 ZNF702PQ9H963 129 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 NACAE9PAV3 2078 aa17.94■□□□□ 0.46
CPNE1-202ENST00000352393 PROK1P58294 105 aa17.93■□□□□ 0.46
CPNE1-202ENST00000352393 DOPEY1Q5JWR5 2465 aa17.93■□□□□ 0.46
CPNE1-202ENST00000352393 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-202ENST00000352393 IGHV3-73A0A0B4J1V6 119 aa17.93■□□□□ 0.46
CPNE1-202ENST00000352393 J3QLI3 93 aa17.93■□□□□ 0.46
CPNE1-202ENST00000352393 ERG28Q9UKR5 140 aa17.93■□□□□ 0.46
CPNE1-202ENST00000352393 SORL1Q92673 2214 aa17.93■□□□□ 0.46
CPNE1-202ENST00000352393 A0A1B0GV72 72 aa17.92■□□□□ 0.46
CPNE1-202ENST00000352393 M0QXV9 152 aa17.92■□□□□ 0.46
CPNE1-202ENST00000352393 LITAFQ99732 161 aa17.92■□□□□ 0.46
CPNE1-202ENST00000352393 TIMM21Q9BVV7 248 aa17.92■□□□□ 0.46
CPNE1-202ENST00000352393 Q5PR19 223 aa17.92■□□□□ 0.46
CPNE1-202ENST00000352393 MAP1AP78559 2803 aaPredicted RBP17.91■□□□□ 0.46
CPNE1-202ENST00000352393 RBMY1BA6NDE4 496 aaKnown RBP17.9■□□□□ 0.46
CPNE1-202ENST00000352393 RBMY1EA6NEQ0 496 aaKnown RBP17.9■□□□□ 0.46
CPNE1-202ENST00000352393 RBMY1DP0C7P1 496 aaKnown RBP17.9■□□□□ 0.46
CPNE1-202ENST00000352393 SPXQ9BT56 116 aa17.9■□□□□ 0.46
CPNE1-202ENST00000352393 DEFB131AP59861 70 aa17.9■□□□□ 0.46
CPNE1-202ENST00000352393 SLC25A20O43772 301 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 HTN1P15515 57 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 CEMP1Q6PRD7 247 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-202ENST00000352393 Q6ZUT4 128 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 TNFRSF18Q9Y5U5 241 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 CRYBG3Q68DQ2 2970 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 CFAP46Q8IYW2 2715 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 H3BMM0 161 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 XGP55808 180 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 PIK3CD-AS1Q5SR53 167 aa17.89■□□□□ 0.45
CPNE1-202ENST00000352393 MT-ATP8P03928 68 aa17.88■□□□□ 0.45
CPNE1-202ENST00000352393 TRAV8-3A0A0A6YYJ7 113 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 ADARB2-AS1A8MUL3 147 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 CHCHD7Q9BUK0 85 aa17.87■□□□□ 0.45
CPNE1-202ENST00000352393 IGHV1-58A0A0C4DH39 117 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms