RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 CR1P17927 2039 aa16.22■□□□□ 0.19
NKX2-4-201ENST00000351817 FSHBP01225 129 aa16.22■□□□□ 0.19
NKX2-4-201ENST00000351817 PTPN13Q12923 2485 aa16.22■□□□□ 0.19
NKX2-4-201ENST00000351817 I3L3M4 83 aa16.21■□□□□ 0.19
NKX2-4-201ENST00000351817 TCTEX1D4Q5JR98 221 aa16.21■□□□□ 0.19
NKX2-4-201ENST00000351817 NFE4Q86UQ8 179 aa16.21■□□□□ 0.19
NKX2-4-201ENST00000351817 MRPL16Q9NX20 251 aaKnown RBP16.21■□□□□ 0.19
NKX2-4-201ENST00000351817 IGHV4-31P0DP07 118 aa16.21■□□□□ 0.18
NKX2-4-201ENST00000351817 GAGE13Q4V321 117 aa16.21■□□□□ 0.18
NKX2-4-201ENST00000351817 SPANXB1Q9NS25 103 aaPredicted RBP16.21■□□□□ 0.18
NKX2-4-201ENST00000351817 ZANQ9Y493 2812 aa16.2■□□□□ 0.18
NKX2-4-201ENST00000351817 P0DMU3 169 aa16.2■□□□□ 0.18
NKX2-4-201ENST00000351817 FAM231AP0DMU4 169 aa16.2■□□□□ 0.18
NKX2-4-201ENST00000351817 FAM231CP0DMU5 169 aa16.2■□□□□ 0.18
NKX2-4-201ENST00000351817 DEFB113Q30KQ7 82 aa16.2■□□□□ 0.18
NKX2-4-201ENST00000351817 C20orf203Q8NBC4 194 aa16.2■□□□□ 0.18
NKX2-4-201ENST00000351817 TSPEAR-AS2P59090 65 aa16.19■□□□□ 0.18
NKX2-4-201ENST00000351817 BEX4Q9NWD9 120 aaPredicted RBP16.19■□□□□ 0.18
NKX2-4-201ENST00000351817 J3QQQ9 107 aa16.18■□□□□ 0.18
NKX2-4-201ENST00000351817 SLC25A29Q8N8R3 303 aa16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 OPRPNQ99935 248 aaPredicted RBP16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 EDA2RQ9HAV5 297 aa16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 PRO0461Q9UI25 63 aa16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 KNCNA6PVL3 124 aa16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 RBMY1A1P0DJD3 496 aaKnown RBP16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 RBMY1CP0DJD4 496 aa16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 LGALS3P17931 250 aaKnown RBP16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 RBMY1FQ15415 496 aaKnown RBP16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 Q5PR19 223 aa16.17■□□□□ 0.18
NKX2-4-201ENST00000351817 AMELXQ99217 191 aa16.16■□□□□ 0.18
NKX2-4-201ENST00000351817 A8MTW9 85 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 J3QR89 54 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 LRRC75A-AS1Q8N1F1 130 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 TSPAN13O95857 204 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 IGHV3-30P01768 117 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 IGHV3-30-5P0DP03 117 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 SLURP1P55000 103 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 DEFB131AP59861 70 aa16.15■□□□□ 0.18
NKX2-4-201ENST00000351817 ABCA12Q86UK0 2595 aa16.14■□□□□ 0.18
NKX2-4-201ENST00000351817 TMEM223A0PJW6 202 aa16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 LEPROTO15243 131 aa16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 APOMO95445 188 aa16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 DOPEY2Q9Y3R5 2298 aa16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 ETDBQ3ZM63 59 aa16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 NDUFA11Q86Y39 141 aa16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 DLX4Q92988 240 aaPredicted RBP16.14■□□□□ 0.17
NKX2-4-201ENST00000351817 SORL1Q92673 2214 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 IGLV4-3A0A075B6K6 122 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 TRAV2A0A0B4J234 112 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 H3BMM0 161 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 SH2D6Q7Z4S9 175 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 KRTAP1-3Q8IUG1 177 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 VCX2Q9H322 139 aa16.13■□□□□ 0.17
NKX2-4-201ENST00000351817 DEFB136Q30KP8 78 aa16.12■□□□□ 0.17
NKX2-4-201ENST00000351817 C18orf65Q6ZTR6 163 aa16.12■□□□□ 0.17
NKX2-4-201ENST00000351817 HTN1P15515 57 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 ZNF22P17026 224 aaPredicted RBP16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 LYRM7Q5U5X0 104 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 MTURNQ8N3F0 131 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 Q96MF0 132 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 NAV2Q8IVL1 2488 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 RHODO00212 210 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 UBE2D3P61077 147 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 UBE2D2P62837 147 aa16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 SPAG8Q99932 426 aaPredicted RBP16.11■□□□□ 0.17
NKX2-4-201ENST00000351817 PRRC2AP48634 2157 aaKnown RBP16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 LOC107984156A0A0G2JMH3 177 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 ARL17AQ8IVW1 177 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 Q8N2B8 174 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 DUX3Q96PT4 197 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 PEMTQ9UBM1 199 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 PYGO1Q9Y3Y4 419 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 A8MWV9 139 aa16.1■□□□□ 0.17
NKX2-4-201ENST00000351817 A0A0J9YXV3 536 aa16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 RBMY1BA6NDE4 496 aaKnown RBP16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 RBMY1EA6NEQ0 496 aaKnown RBP16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 M0R2P5 195 aa16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 RBMY1DP0C7P1 496 aaKnown RBP16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 CFC1BP0CG36 223 aa16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 CFC1P0CG37 223 aa16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 PIK3CD-AS1Q5SR53 167 aa16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 IGHV3-73A0A0B4J1V6 119 aa16.09■□□□□ 0.17
NKX2-4-201ENST00000351817 NBPF19A0A087WUL8 3843 aa16.08■□□□□ 0.16
NKX2-4-201ENST00000351817 APCP25054 2843 aa16.08■□□□□ 0.16
NKX2-4-201ENST00000351817 PSMB2P49721 201 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 ZNF415Q09FC8 603 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 CFAP126Q5VTH2 177 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 TNFRSF18Q9Y5U5 241 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 CRYBA4P53673 196 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 PROK1P58294 105 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 TMEM61Q8N0U2 210 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 PTH2Q96A98 100 aa16.07■□□□□ 0.16
NKX2-4-201ENST00000351817 C10orf126Q8N4M7 172 aa16.06■□□□□ 0.16
NKX2-4-201ENST00000351817 CD28P10747 220 aa16.06■□□□□ 0.16
NKX2-4-201ENST00000351817 SFTA2Q6UW10 78 aa16.06■□□□□ 0.16
NKX2-4-201ENST00000351817 C4orf3Q8WVX3 66 aa16.06■□□□□ 0.16
NKX2-4-201ENST00000351817 TSSC4Q9Y5U2 329 aaPredicted RBP16.06■□□□□ 0.16
NKX2-4-201ENST00000351817 ZNF469Q96JG9 3925 aaPredicted RBP16.06■□□□□ 0.16
NKX2-4-201ENST00000351817 PRO1854Q9UHT4 67 aa16.05■□□□□ 0.16
NKX2-4-201ENST00000351817 MXRA5Q9NR99 2828 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms