RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 C20orf203Q8NBC4 194 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
NUP50-201ENST00000347635 UFSP1Q6NVU6 142 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 INSL3P51460 131 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 SLURP1P55000 103 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 CFHR3Q02985 330 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 S100A7L2Q5SY68 101 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 UBE2DNLQ8IWF7 75 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 U3KQE9 123 aa11.12□□□□□ -0.63
NUP50-201ENST00000347635 ARFGEF3Q5TH69 2177 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 GAGE7O76087 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 GAGE12FP0CL80 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 GAGE12GP0CL81 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 GAGE12IP0CL82 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 GAGE6Q13070 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 SPG11Q96JI7 2443 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 A0A096LNJ9 63 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
NUP50-201ENST00000347635 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 IGHV4OR15-8A0A075B7B6 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 A0A087WW49 117 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 A0A0J9YX75 114 aa11.11□□□□□ -0.63
NUP50-201ENST00000347635 SS18Q15532 418 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 C9orf153Q5TBE3 101 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 DEFB136Q30KP8 78 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 HHLA3Q9XRX5 114 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 IGHV4-4A0A075B6R2 117 aa11.1□□□□□ -0.63
NUP50-201ENST00000347635 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 DSCAMO60469 2012 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 PLXNB1O43157 2135 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 DPH3Q96FX2 82 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 A0A0J9YY99 117 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 PFN2P35080 140 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 PRR9Q5T870 116 aa11.09□□□□□ -0.63
NUP50-201ENST00000347635 TANC2Q9HCD6 1990 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 B5MCH6 92 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 GHRHP01286 108 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 IGHV1-58A0A0C4DH39 117 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 IGHV3-30-3P0DP02 117 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 Q6ZUT4 128 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 SS18L2Q9UHA2 77 aa11.08□□□□□ -0.64
NUP50-201ENST00000347635 APRG1Q8IVJ8 170 aa11.07□□□□□ -0.64
NUP50-201ENST00000347635 RAI1Q7Z5J4 1906 aaPredicted RBP11.07□□□□□ -0.64
NUP50-201ENST00000347635 HERV-K104P63124 156 aa11.07□□□□□ -0.64
NUP50-201ENST00000347635 CDSNQ15517 529 aa11.07□□□□□ -0.64
NUP50-201ENST00000347635 ODF3Q96PU9 254 aa11.07□□□□□ -0.64
NUP50-201ENST00000347635 SOCS3O14543 225 aa11.07□□□□□ -0.64
NUP50-201ENST00000347635 ACYP1P07311 99 aa11.07□□□□□ -0.64
NUP50-201ENST00000347635 NAV3Q8IVL0 2385 aa11.06□□□□□ -0.64
NUP50-201ENST00000347635 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
NUP50-201ENST00000347635 DAND5Q8N907 189 aa11.06□□□□□ -0.64
NUP50-201ENST00000347635 BAALC-AS2P0C853 105 aa11.06□□□□□ -0.64
NUP50-201ENST00000347635 TET2Q6N021 2002 aaPredicted RBP11.06□□□□□ -0.64
NUP50-201ENST00000347635 A0A0J9YXY3 114 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 LGALS9O00182 355 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 MT-ATP8P03928 68 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 F5H768 121 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 F8W735 103 aaPredicted RBP11.05□□□□□ -0.64
NUP50-201ENST00000347635 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
NUP50-201ENST00000347635 H3BT86 120 aa11.04□□□□□ -0.64
NUP50-201ENST00000347635 TRAV26-1A0A087WT03 109 aa11.04□□□□□ -0.64
NUP50-201ENST00000347635 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
NUP50-201ENST00000347635 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
NUP50-201ENST00000347635 CITED2Q99967 270 aaPredicted RBP11.04□□□□□ -0.64
NUP50-201ENST00000347635 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
NUP50-201ENST00000347635 LAMTOR3Q9UHA4 124 aa11.04□□□□□ -0.64
NUP50-201ENST00000347635 K7EQD1 137 aa11.03□□□□□ -0.64
NUP50-201ENST00000347635 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
NUP50-201ENST00000347635 NOTCH2Q04721 2471 aa11.03□□□□□ -0.64
NUP50-201ENST00000347635 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
NUP50-201ENST00000347635 MIAQ16674 131 aa11.03□□□□□ -0.64
NUP50-201ENST00000347635 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
NUP50-201ENST00000347635 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
NUP50-201ENST00000347635 Q6ZQT7 251 aa11.03□□□□□ -0.64
NUP50-201ENST00000347635 IGHV3-30P01768 117 aa11.02□□□□□ -0.64
NUP50-201ENST00000347635 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.64
NUP50-201ENST00000347635 CFAP126Q5VTH2 177 aa11.02□□□□□ -0.64
NUP50-201ENST00000347635 C16orf74Q96GX8 76 aa11.02□□□□□ -0.64
NUP50-201ENST00000347635 PSMG3-AS1Q96PY0 264 aa11.02□□□□□ -0.64
NUP50-201ENST00000347635 M0QY20 66 aa11.02□□□□□ -0.65
NUP50-201ENST00000347635 DAZ2Q13117 558 aaKnown RBP11.02□□□□□ -0.65
NUP50-201ENST00000347635 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
NUP50-201ENST00000347635 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
NUP50-201ENST00000347635 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
NUP50-201ENST00000347635 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms