RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CFAP126Q5VTH2 177 aa16.21■□□□□ 0.19
PDLIM2-203ENST00000339162 GTSCR1Q86UQ5 136 aa16.21■□□□□ 0.19
PDLIM2-203ENST00000339162 RNASE8Q8TDE3 154 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-203ENST00000339162 SPXQ9BT56 116 aa16.21■□□□□ 0.19
PDLIM2-203ENST00000339162 FBN1P35555 2871 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-203ENST00000339162 A8MWV9 139 aa16.21■□□□□ 0.18
PDLIM2-203ENST00000339162 PRSS1P07477 247 aa16.21■□□□□ 0.18
PDLIM2-203ENST00000339162 KRTAP24-1Q3LI83 254 aa16.21■□□□□ 0.18
PDLIM2-203ENST00000339162 COL5A1-AS1Q5SY13 56 aa16.21■□□□□ 0.18
PDLIM2-203ENST00000339162 NACAE9PAV3 2078 aa16.2■□□□□ 0.18
PDLIM2-203ENST00000339162 Q6ZSN1 163 aa16.2■□□□□ 0.18
PDLIM2-203ENST00000339162 DKK2Q9UBU2 259 aa16.2■□□□□ 0.18
PDLIM2-203ENST00000339162 Q9UF83 564 aa16.2■□□□□ 0.18
PDLIM2-203ENST00000339162 UFSP1Q6NVU6 142 aa16.19■□□□□ 0.18
PDLIM2-203ENST00000339162 CSNK1G2-AS1Q8NCQ2 148 aa16.19■□□□□ 0.18
PDLIM2-203ENST00000339162 GOLT1BQ9Y3E0 138 aa16.19■□□□□ 0.18
PDLIM2-203ENST00000339162 TRGV1A0A0A0MS02 117 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 VCYO14598 125 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 BATFQ16520 125 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 LGALS9BQ3B8N2 356 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 LGALS9CQ6DKI2 356 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 TRBV6-5A0A0K0K1A5 114 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 TMEM263Q8WUH6 116 aaKnown RBP16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 TP73-AS1Q9UF72 201 aa16.18■□□□□ 0.18
PDLIM2-203ENST00000339162 C2orf66Q6UXQ4 117 aa16.17■□□□□ 0.18
PDLIM2-203ENST00000339162 C1QTNF4Q9BXJ3 329 aa16.17■□□□□ 0.18
PDLIM2-203ENST00000339162 Q6ZN92 141 aa16.17■□□□□ 0.18
PDLIM2-203ENST00000339162 IL17DQ8TAD2 202 aa16.17■□□□□ 0.18
PDLIM2-203ENST00000339162 PTH2Q96A98 100 aa16.17■□□□□ 0.18
PDLIM2-203ENST00000339162 KIR2DL4Q99706 377 aa16.17■□□□□ 0.18
PDLIM2-203ENST00000339162 TRBV27A0A0K0K1C4 114 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 ATP5LO75964 103 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 TCTAP57738 103 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 RPL32P62910 135 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 PIK3CD-AS1Q5SR53 167 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 ZFP2Q6ZN57 461 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 Q6ZTI0 123 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 TOMM6Q96B49 74 aa16.16■□□□□ 0.18
PDLIM2-203ENST00000339162 K7EMI3 77 aa16.15■□□□□ 0.18
PDLIM2-203ENST00000339162 SCGB3A1Q96QR1 104 aa16.15■□□□□ 0.18
PDLIM2-203ENST00000339162 NOP10Q9NPE3 64 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-203ENST00000339162 HSBP1L1C9JCN9 74 aa16.15■□□□□ 0.18
PDLIM2-203ENST00000339162 HNRNPA3P51991 378 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-203ENST00000339162 ODF1Q14990 250 aa16.14■□□□□ 0.17
PDLIM2-203ENST00000339162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-203ENST00000339162 STPG4Q8N801 248 aa16.14■□□□□ 0.17
PDLIM2-203ENST00000339162 NBEAL2Q6ZNJ1 2754 aa16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 RS1O15537 224 aa16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 RPL39P62891 51 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 MRPS16Q9Y3D3 137 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 PLAC8L1A1L4L8 177 aa16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 H7C1H1 209 aa16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 IGHV3-53P01767 116 aa16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 NPSP0C0P6 89 aa16.13■□□□□ 0.17
PDLIM2-203ENST00000339162 TP53TG1Q9Y2A0 90 aa16.12■□□□□ 0.17
PDLIM2-203ENST00000339162 STAB1Q9NY15 2570 aa16.12■□□□□ 0.17
PDLIM2-203ENST00000339162 RRN3P1Q2M238 152 aa16.11■□□□□ 0.17
PDLIM2-203ENST00000339162 ZNF479Q96JC4 524 aa16.11■□□□□ 0.17
PDLIM2-203ENST00000339162 WFDC9Q8NEX5 89 aa16.11■□□□□ 0.17
PDLIM2-203ENST00000339162 OR4C5Q8NGB2 326 aa16.11■□□□□ 0.17
PDLIM2-203ENST00000339162 C16orf74Q96GX8 76 aa16.1■□□□□ 0.17
PDLIM2-203ENST00000339162 RHODO00212 210 aa16.1■□□□□ 0.17
PDLIM2-203ENST00000339162 CYSLTR1Q9Y271 337 aa16.1■□□□□ 0.17
PDLIM2-203ENST00000339162 I3L3M4 83 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 TSHBP01222 138 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 EMP1P54849 157 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 ANKRD39Q53RE8 183 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 EDA2RQ9HAV5 297 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 MRPL35Q9NZE8 188 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 TNFRSF18Q9Y5U5 241 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 PRIMA1Q86XR5 153 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 CBY1Q9Y3M2 126 aa16.09■□□□□ 0.17
PDLIM2-203ENST00000339162 NEXN-AS1Q8NBZ9 246 aa16.08■□□□□ 0.16
PDLIM2-203ENST00000339162 GAGE12BA1L429 117 aa16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 GAGE7O76087 117 aa16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 GAGE12FP0CL80 117 aa16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 GAGE12GP0CL81 117 aa16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 GAGE12IP0CL82 117 aa16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 DAZ2Q13117 558 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 ERASQ7Z444 233 aa16.07■□□□□ 0.16
PDLIM2-203ENST00000339162 BAALCQ8WXS3 180 aa16.06■□□□□ 0.16
PDLIM2-203ENST00000339162 ZMAT4Q9H898 229 aa16.06■□□□□ 0.16
PDLIM2-203ENST00000339162 MAST4O15021 2626 aa16.06■□□□□ 0.16
PDLIM2-203ENST00000339162 A0A087WX48 190 aa16.06■□□□□ 0.16
PDLIM2-203ENST00000339162 IGKCP01834 107 aa16.05■□□□□ 0.16
PDLIM2-203ENST00000339162 RIPPLY3P57055 190 aa16.05■□□□□ 0.16
PDLIM2-203ENST00000339162 ZC2HC1BQ5TFG8 222 aa16.05■□□□□ 0.16
PDLIM2-203ENST00000339162 C3orf56Q8N813 242 aa16.05■□□□□ 0.16
PDLIM2-203ENST00000339162 IGHV3-38A0A0C4DH36 116 aa16.04■□□□□ 0.16
PDLIM2-203ENST00000339162 HHLA3Q9XRX5 114 aa16.04■□□□□ 0.16
PDLIM2-203ENST00000339162 IGIPA6NJ69 53 aa16.04■□□□□ 0.16
PDLIM2-203ENST00000339162 PHLDA1Q8WV24 401 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-203ENST00000339162 TRGV2A0A075B6R0 118 aa16.03■□□□□ 0.16
PDLIM2-203ENST00000339162 DPM2O94777 84 aa16.03■□□□□ 0.16
PDLIM2-203ENST00000339162 OXLD1Q5BKU9 147 aa16.03■□□□□ 0.16
PDLIM2-203ENST00000339162 ORAOV1Q8WV07 137 aa16.03■□□□□ 0.16
PDLIM2-203ENST00000339162 TRAV4A0A0B4J268 109 aa16.02■□□□□ 0.16
PDLIM2-203ENST00000339162 RHOHQ15669 191 aa16.02■□□□□ 0.16
PDLIM2-203ENST00000339162 OPRPNQ99935 248 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-203ENST00000339162 HINT1P49773 126 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms