RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KMT2BQ9UMN6 2715 aaPredicted RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 TRAV12-1A0A0B4J245 112 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 A0A0J9YXV3 536 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 C20orf173Q96LM9 149 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 CITED1Q99966 193 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 PIFOQ8TCI5 191 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 PSMG3-AS1Q96PY0 264 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 PRRC2CQ9Y520 2896 aaKnown RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 RHOHQ15669 191 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 Q6ZSV7 163 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 CRIP2P52943 208 aaPredicted RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 RPL39P62891 51 aaKnown RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 DEFB125Q8N687 156 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 MAP6D1Q9H9H5 199 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 IGKV2-29A2NJV5 120 aaPredicted RBP4.74□□□□□ -1.65
PRKDC-202ENST00000338368 J3QQQ9 107 aa4.74□□□□□ -1.65
PRKDC-202ENST00000338368 H3BMM0 161 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 LINC00158P58513 81 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 ODF1Q14990 250 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 TAL2Q16559 108 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 KIR2DL5BQ8NHK3 375 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 CHD8Q9HCK8 2581 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 NOP10Q9NPE3 64 aaKnown RBP4.73□□□□□ -1.65
PRKDC-202ENST00000338368 NDUFA12Q9UI09 145 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 INAFM2P0DMQ5 153 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 GAGE6Q13070 117 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 C9orf118A6NHY6 69 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 CRLF1O75462 422 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 C20orf203Q8NBC4 194 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 TOMM6Q96B49 74 aa4.73□□□□□ -1.65
PRKDC-202ENST00000338368 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 LINC00310P59036 64 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 RNASE1P07998 156 aaKnown RBP4.72□□□□□ -1.65
PRKDC-202ENST00000338368 DAD1P61803 113 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 TMEM243Q9BU79 118 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 ODF3Q96PU9 254 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 DEFB114Q30KQ6 69 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 ATP6V0E2Q8NHE4 81 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 TIMM17AQ99595 171 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 IGF2RP11717 2491 aa4.72□□□□□ -1.65
PRKDC-202ENST00000338368 BBC3Q96PG8 261 aaPredicted RBP4.72□□□□□ -1.65
PRKDC-202ENST00000338368 CEND1Q8N111 149 aa4.71□□□□□ -1.65
PRKDC-202ENST00000338368 BAALCQ8WXS3 180 aa4.71□□□□□ -1.65
PRKDC-202ENST00000338368 PRR9Q5T870 116 aa4.71□□□□□ -1.65
PRKDC-202ENST00000338368 ATP5G1P05496 136 aa4.71□□□□□ -1.65
PRKDC-202ENST00000338368 CCL18P55774 89 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 CST9LQ9H4G1 147 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 LAMA3Q16787 3333 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 ATXN8Q156A1 80 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 E9PLD3 99 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 HIST2H2BDQ6DRA6 164 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 LINC01006Q8NI28 216 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 A0A096LPF7 62 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 C12orf74Q32Q52 190 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 A0A1W2PPM0 123 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 C11orf86A6NJI1 115 aa4.71□□□□□ -1.66
PRKDC-202ENST00000338368 C18orf65Q6ZTR6 163 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 PAX4O43316 350 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 ACYP1P07311 99 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 ZNF561-AS1K7EIQ3 104 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 RNASE3P12724 160 aaKnown RBP4.7□□□□□ -1.66
PRKDC-202ENST00000338368 U3KQK5 164 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 K7EP34 96 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 CCL25O15444 150 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 HERVK_113P63121 156 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 DCANP1Q8TF63 244 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 C11orf68Q9H3H3 251 aaKnown RBP4.7□□□□□ -1.66
PRKDC-202ENST00000338368 F5H768 121 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 NFE4Q86UQ8 179 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 SHISA2Q6UWI4 295 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 JMJD1CQ15652 2540 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 Q6ZQT7 251 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 K7EP13 123 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 BRI3O95415 125 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 PRO1854Q9UHT4 67 aa4.7□□□□□ -1.66
PRKDC-202ENST00000338368 K7ERJ3 54 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 GAS8-AS1O95177 125 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 EDN2P20800 178 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 COX8CQ7Z4L0 72 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 C4orf48Q5BLP8 95 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 TAX1BP3O14907 124 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 LEPROTO15243 131 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 ACANP16112 2415 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 H3BMG7 143 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 CNFNQ9BYD5 112 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 HIGD1BQ9P298 99 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 ZNF580Q9UK33 172 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 K7EQD1 137 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 FXYD2P54710 66 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 OPRPNQ99935 248 aaPredicted RBP4.69□□□□□ -1.66
PRKDC-202ENST00000338368 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
PRKDC-202ENST00000338368 C9JAW5 83 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms