RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 MINOS1Q5TGZ0 78 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 MINOS1-NBL1R4GNA1 71 aa10.37□□□□□ -0.75
SYNE3-201ENST00000334258 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 SNCGO76070 127 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
SYNE3-201ENST00000334258 J3QQQ9 107 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 JPT2Q9H910 190 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 HELZ2Q9BYK8 2649 aaKnown RBP10.36□□□□□ -0.75
SYNE3-201ENST00000334258 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 TSHBP01222 138 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 EBI3Q14213 229 aa10.36□□□□□ -0.75
SYNE3-201ENST00000334258 CENPVL3A0A0U1RRI6 287 aa10.35□□□□□ -0.75
SYNE3-201ENST00000334258 CRIP2P52943 208 aaPredicted RBP10.35□□□□□ -0.75
SYNE3-201ENST00000334258 LENEPQ9Y5L5 61 aa10.35□□□□□ -0.75
SYNE3-201ENST00000334258 FASNP49327 2511 aaKnown RBP10.35□□□□□ -0.75
SYNE3-201ENST00000334258 IGHV4-39P01824 125 aa10.35□□□□□ -0.75
SYNE3-201ENST00000334258 GPHB5Q86YW7 130 aa10.35□□□□□ -0.75
SYNE3-201ENST00000334258 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
SYNE3-201ENST00000334258 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 VCYO14598 125 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 ACANP16112 2415 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 OVOL1O14753 267 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 SRD5A1P18405 259 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 TMEM219Q86XT9 240 aa10.34□□□□□ -0.75
SYNE3-201ENST00000334258 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
SYNE3-201ENST00000334258 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
SYNE3-201ENST00000334258 SDHAF1A6NFY7 115 aa10.33□□□□□ -0.76
SYNE3-201ENST00000334258 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
SYNE3-201ENST00000334258 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
SYNE3-201ENST00000334258 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
SYNE3-201ENST00000334258 OPRPNQ99935 248 aaPredicted RBP10.33□□□□□ -0.76
SYNE3-201ENST00000334258 CREBBPQ92793 2442 aa10.33□□□□□ -0.76
SYNE3-201ENST00000334258 IGHV3OR16-10A0A075B7F0 116 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 SAA4P35542 130 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 UNQ9165/PRO28630Q6UXU0 137 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 TEX15Q9BXT5 2789 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 PRSS2P07478 247 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 ITLN2Q8WWU7 325 aaPredicted RBP10.32□□□□□ -0.76
SYNE3-201ENST00000334258 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 BBC3Q96PG8 261 aaPredicted RBP10.32□□□□□ -0.76
SYNE3-201ENST00000334258 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 U3KQE9 123 aa10.32□□□□□ -0.76
SYNE3-201ENST00000334258 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
SYNE3-201ENST00000334258 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
SYNE3-201ENST00000334258 HECTD1Q9ULT8 2610 aa10.31□□□□□ -0.76
SYNE3-201ENST00000334258 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
SYNE3-201ENST00000334258 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
SYNE3-201ENST00000334258 ZNF469Q96JG9 3925 aaPredicted RBP10.3□□□□□ -0.76
SYNE3-201ENST00000334258 TENM4Q6N022 2769 aa10.3□□□□□ -0.76
SYNE3-201ENST00000334258 TRBV12-3P01733 135 aa10.3□□□□□ -0.76
SYNE3-201ENST00000334258 Q8N1Y9 231 aa10.3□□□□□ -0.76
SYNE3-201ENST00000334258 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 ZNF56Q15929 161 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
SYNE3-201ENST00000334258 ZNF876PQ49A33 203 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 ADARB2-AS1A8MUL3 147 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 ATXN8Q156A1 80 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 MTORP42345 2549 aa10.29□□□□□ -0.76
SYNE3-201ENST00000334258 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 NF1P21359 2839 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 ITPR2Q14571 2701 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 TRAV12-3A0A0B4J271 114 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 UBE2E1P51965 193 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 FBXL19-AS1Q494R0 122 aa10.28□□□□□ -0.76
SYNE3-201ENST00000334258 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.76
SYNE3-201ENST00000334258 A0A087WW49 117 aa10.27□□□□□ -0.76
SYNE3-201ENST00000334258 MED14OSP0DP75 135 aa10.27□□□□□ -0.76
SYNE3-201ENST00000334258 LINC01620Q4KN68 170 aa10.27□□□□□ -0.76
SYNE3-201ENST00000334258 FAM19A5Q7Z5A7 132 aaPredicted RBP10.27□□□□□ -0.76
SYNE3-201ENST00000334258 MUC4Q99102 2169 aa10.27□□□□□ -0.77
SYNE3-201ENST00000334258 IGKV3-20P01619 116 aa10.27□□□□□ -0.77
SYNE3-201ENST00000334258 LINC00315P59091 139 aa10.27□□□□□ -0.77
SYNE3-201ENST00000334258 BPESC1Q9GZL8 116 aa10.27□□□□□ -0.77
SYNE3-201ENST00000334258 SIRPDQ9H106 197 aa10.27□□□□□ -0.77
SYNE3-201ENST00000334258 ELANEP08246 267 aa10.27□□□□□ -0.77
SYNE3-201ENST00000334258 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.77
SYNE3-201ENST00000334258 SORL1Q92673 2214 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 MAPK1IP1LQ8NDC0 245 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 AMELXQ99217 191 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 KLK5Q9Y337 293 aaPredicted RBP10.26□□□□□ -0.77
SYNE3-201ENST00000334258 KIF25-AS1Q9Y6Z4 181 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.26□□□□□ -0.77
SYNE3-201ENST00000334258 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
SYNE3-201ENST00000334258 LEPROTO15243 131 aa10.25□□□□□ -0.77
SYNE3-201ENST00000334258 C15orf53Q8NAA6 179 aa10.25□□□□□ -0.77
SYNE3-201ENST00000334258 RHPN1-AS1Q9BWJ2 59 aa10.25□□□□□ -0.77
SYNE3-201ENST00000334258 C5orf56Q8N8D9 126 aa10.25□□□□□ -0.77
SYNE3-201ENST00000334258 APCP25054 2843 aa10.25□□□□□ -0.77
SYNE3-201ENST00000334258 C2orf82Q6UX34 121 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms