RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 IGHG2P01859 326 aa17.55■□□□□ 0.4
TSKU-201ENST00000333090 GNLYP22749 145 aa17.55■□□□□ 0.4
TSKU-201ENST00000333090 M0QY20 66 aa17.55■□□□□ 0.4
TSKU-201ENST00000333090 LEPROTO15243 131 aa17.55■□□□□ 0.4
TSKU-201ENST00000333090 ERG28Q9UKR5 140 aa17.55■□□□□ 0.4
TSKU-201ENST00000333090 H3BUX3 64 aa17.54■□□□□ 0.4
TSKU-201ENST00000333090 MUSTN1Q8IVN3 82 aa17.54■□□□□ 0.4
TSKU-201ENST00000333090 PIEZO1Q92508 2521 aa17.54■□□□□ 0.4
TSKU-201ENST00000333090 DCANP1Q8TF63 244 aa17.54■□□□□ 0.4
TSKU-201ENST00000333090 IGHV3-16A0A0C4DH30 117 aa17.53■□□□□ 0.4
TSKU-201ENST00000333090 TMEM263Q8WUH6 116 aaKnown RBP17.53■□□□□ 0.4
TSKU-201ENST00000333090 H3BUA1 57 aa17.53■□□□□ 0.4
TSKU-201ENST00000333090 P0DMU3 169 aa17.53■□□□□ 0.4
TSKU-201ENST00000333090 FAM231AP0DMU4 169 aa17.53■□□□□ 0.4
TSKU-201ENST00000333090 FAM231CP0DMU5 169 aa17.53■□□□□ 0.4
TSKU-201ENST00000333090 Q1RN00 199 aa17.53■□□□□ 0.4
TSKU-201ENST00000333090 IGHV4-38-2P0DP08 117 aa17.52■□□□□ 0.4
TSKU-201ENST00000333090 ZNF22P17026 224 aaPredicted RBP17.52■□□□□ 0.4
TSKU-201ENST00000333090 NSUN5P1Q3KNT7 163 aa17.52■□□□□ 0.4
TSKU-201ENST00000333090 ZNF580Q9UK33 172 aa17.52■□□□□ 0.4
TSKU-201ENST00000333090 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.52■□□□□ 0.43e-11■■■□□ 15.5
TSKU-201ENST00000333090 A0A0J9YXV3 536 aa17.52■□□□□ 0.39
TSKU-201ENST00000333090 C9orf85Q96MD7 179 aa17.52■□□□□ 0.39
TSKU-201ENST00000333090 RHODO00212 210 aa17.51■□□□□ 0.39
TSKU-201ENST00000333090 RHOHQ15669 191 aa17.51■□□□□ 0.39
TSKU-201ENST00000333090 Q8N1Y9 231 aa17.51■□□□□ 0.39
TSKU-201ENST00000333090 SORL1Q92673 2214 aa17.51■□□□□ 0.39
TSKU-201ENST00000333090 TMEM262E9PQX1 116 aa17.51■□□□□ 0.39
TSKU-201ENST00000333090 RNF183Q96D59 192 aa17.5■□□□□ 0.39
TSKU-201ENST00000333090 USP9XQ93008 2570 aaPredicted RBP17.5■□□□□ 0.39
TSKU-201ENST00000333090 C20orf203Q8NBC4 194 aa17.5■□□□□ 0.39
TSKU-201ENST00000333090 A0A0B4J2C4 111 aa17.49■□□□□ 0.39
TSKU-201ENST00000333090 ELANEP08246 267 aa17.49■□□□□ 0.39
TSKU-201ENST00000333090 BEX4Q9NWD9 120 aaPredicted RBP17.49■□□□□ 0.39
TSKU-201ENST00000333090 ADARB2-AS1A8MUL3 147 aa17.48■□□□□ 0.39
TSKU-201ENST00000333090 BRI3O95415 125 aa17.48■□□□□ 0.39
TSKU-201ENST00000333090 IGHV4-39P01824 125 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 ZFAND6Q6FIF0 208 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 ANAPC13Q9BS18 74 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 POLQO75417 2590 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 ZANQ9Y493 2812 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 ZFYVE26Q68DK2 2539 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 IGSF10Q6WRI0 2623 aa17.47■□□□□ 0.39
TSKU-201ENST00000333090 IGLV4-3A0A075B6K6 122 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 IGLV1-40P01703 118 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 SPINK13Q1W4C9 94 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 TEX29Q8N6K0 151 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 NTN5Q8WTR8 489 aaPredicted RBP17.46■□□□□ 0.39
TSKU-201ENST00000333090 SPXQ9BT56 116 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 A6NDX4 124 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 I3L3M4 83 aa17.46■□□□□ 0.39
TSKU-201ENST00000333090 CSPG4Q6UVK1 2322 aa17.45■□□□□ 0.38
TSKU-201ENST00000333090 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.45■□□□□ 0.38
TSKU-201ENST00000333090 MYO18BQ8IUG5 2567 aa17.45■□□□□ 0.38
TSKU-201ENST00000333090 A0A0J9YXY3 114 aa17.45■□□□□ 0.38
TSKU-201ENST00000333090 GATA3P23771 443 aa17.45■□□□□ 0.38
TSKU-201ENST00000333090 IGHV4-61A0A0C4DH41 118 aa17.44■□□□□ 0.38
TSKU-201ENST00000333090 TMEM95Q3KNT9 176 aa17.44■□□□□ 0.38
TSKU-201ENST00000333090 IGHV1OR15-1A0A075B7D0 117 aa17.44■□□□□ 0.38
TSKU-201ENST00000333090 K7EMT4 169 aa17.44■□□□□ 0.38
TSKU-201ENST00000333090 M0R2P5 195 aa17.44■□□□□ 0.38
TSKU-201ENST00000333090 ATXN8Q156A1 80 aa17.44■□□□□ 0.38
TSKU-201ENST00000333090 CREBBPQ92793 2442 aa17.43■□□□□ 0.38
TSKU-201ENST00000333090 CACNA1AO00555 2505 aa17.43■□□□□ 0.38
TSKU-201ENST00000333090 A0A0J9YX75 114 aa17.43■□□□□ 0.38
TSKU-201ENST00000333090 LINC01620Q4KN68 170 aa17.43■□□□□ 0.38
TSKU-201ENST00000333090 PRSS2P07478 247 aa17.42■□□□□ 0.38
TSKU-201ENST00000333090 IGHV3-30-3P0DP02 117 aa17.42■□□□□ 0.38
TSKU-201ENST00000333090 M0QXV9 152 aa17.42■□□□□ 0.38
TSKU-201ENST00000333090 SNRPD3P62318 126 aaKnown RBP17.41■□□□□ 0.38
TSKU-201ENST00000333090 CUBNO60494 3623 aa17.41■□□□□ 0.38
TSKU-201ENST00000333090 TRAV8-3A0A0A6YYJ7 113 aa17.41■□□□□ 0.38
TSKU-201ENST00000333090 CD28P10747 220 aa17.41■□□□□ 0.38
TSKU-201ENST00000333090 CITED1Q99966 193 aa17.41■□□□□ 0.38
TSKU-201ENST00000333090 TIMM21Q9BVV7 248 aa17.41■□□□□ 0.38
TSKU-201ENST00000333090 IGHV3-73A0A0B4J1V6 119 aa17.4■□□□□ 0.38
TSKU-201ENST00000333090 TEX49A0A1B0GTD5 131 aa17.4■□□□□ 0.38
TSKU-201ENST00000333090 TRIAP1O43715 76 aa17.4■□□□□ 0.38
TSKU-201ENST00000333090 PRRC2AP48634 2157 aaKnown RBP17.4■□□□□ 0.38
TSKU-201ENST00000333090 USP9YO00507 2555 aaPredicted RBP17.4■□□□□ 0.38
TSKU-201ENST00000333090 DOPEY2Q9Y3R5 2298 aa17.4■□□□□ 0.38
TSKU-201ENST00000333090 ODF3Q96PU9 254 aa17.4■□□□□ 0.38
TSKU-201ENST00000333090 RNASE13Q5GAN3 156 aaKnown RBP17.39■□□□□ 0.37
TSKU-201ENST00000333090 CEMP1Q6PRD7 247 aaPredicted RBP17.39■□□□□ 0.37
TSKU-201ENST00000333090 SNCGO76070 127 aa17.38■□□□□ 0.37
TSKU-201ENST00000333090 HTN1P15515 57 aa17.38■□□□□ 0.37
TSKU-201ENST00000333090 CFHR3Q02985 330 aa17.37■□□□□ 0.37
TSKU-201ENST00000333090 NRGNQ92686 78 aa17.37■□□□□ 0.37
TSKU-201ENST00000333090 ACACBO00763 2458 aa17.37■□□□□ 0.37
TSKU-201ENST00000333090 TRAV4A0A0B4J268 109 aa17.37■□□□□ 0.37
TSKU-201ENST00000333090 LITAFQ99732 161 aa17.37■□□□□ 0.37
TSKU-201ENST00000333090 CRLF1O75462 422 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 GAGE2BQ13066 116 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 GAGE2EQ4V326 116 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 C10orf99Q6UWK7 81 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 PIMREGQ9BSJ6 248 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 PRORYQ9H606 182 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 GAGE2DQ9UEU5 116 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 TRBV30A0A0K0K1B3 111 aa17.36■□□□□ 0.37
TSKU-201ENST00000333090 NPC2P61916 151 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms