RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SH2D6Q7Z4S9 175 aa11.4□□□□□ -0.59
BRCC3-201ENST00000330045 A0A0J9YY99 117 aa11.39□□□□□ -0.59
BRCC3-201ENST00000330045 M0QY20 66 aa11.39□□□□□ -0.59
BRCC3-201ENST00000330045 PLA2G2AP14555 144 aa11.39□□□□□ -0.59
BRCC3-201ENST00000330045 ZNF876PQ49A33 203 aa11.39□□□□□ -0.59
BRCC3-201ENST00000330045 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
BRCC3-201ENST00000330045 PRO0461Q9UI25 63 aa11.39□□□□□ -0.59
BRCC3-201ENST00000330045 IGHV1OR15-1A0A075B7D0 117 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 J3QR89 54 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 AKAP9Q99996 3911 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 PDZD2O15018 2839 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 TMEM89A2RUT3 159 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 CR1P17927 2039 aa11.38□□□□□ -0.59
BRCC3-201ENST00000330045 TGFAP01135 160 aa11.37□□□□□ -0.59
BRCC3-201ENST00000330045 SYNJ2BPP57105 145 aa11.37□□□□□ -0.59
BRCC3-201ENST00000330045 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 DEFB113Q30KQ7 82 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 NSUN5P1Q3KNT7 163 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 Q5PR19 223 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 TRPT1Q86TN4 253 aaKnown RBP11.36□□□□□ -0.59
BRCC3-201ENST00000330045 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
BRCC3-201ENST00000330045 APOMO95445 188 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 RHOHQ15669 191 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 HECTD1Q9ULT8 2610 aa11.36□□□□□ -0.59
BRCC3-201ENST00000330045 TSPAN13O95857 204 aa11.35□□□□□ -0.59
BRCC3-201ENST00000330045 DSCR9P59020 149 aa11.35□□□□□ -0.59
BRCC3-201ENST00000330045 KRTAP1-3Q8IUG1 177 aa11.35□□□□□ -0.59
BRCC3-201ENST00000330045 SPAG8Q99932 426 aaPredicted RBP11.35□□□□□ -0.59
BRCC3-201ENST00000330045 FLNAP21333 2647 aaKnown RBP11.35□□□□□ -0.59
BRCC3-201ENST00000330045 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
BRCC3-201ENST00000330045 DLX4Q92988 240 aaPredicted RBP11.35□□□□□ -0.59
BRCC3-201ENST00000330045 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
BRCC3-201ENST00000330045 UNC79Q9P2D8 2635 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 SLC25A29Q8N8R3 303 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 LINC01356Q8N9X3 169 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 OPRPNQ99935 248 aaPredicted RBP11.34□□□□□ -0.59
BRCC3-201ENST00000330045 LOC107984156A0A0G2JMH3 177 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 J3QQQ9 107 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 P0DMU3 169 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 FAM231AP0DMU4 169 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 FAM231CP0DMU5 169 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 ARL17AQ8IVW1 177 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 Q96MF0 132 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 DUX5Q96PT3 197 aa11.34□□□□□ -0.59
BRCC3-201ENST00000330045 IGHV3-30P01768 117 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 IGHV3-30-5P0DP03 117 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 SFTA2Q6UW10 78 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 IGHV4-31P0DP07 118 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
BRCC3-201ENST00000330045 C20orf203Q8NBC4 194 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 AMELXQ99217 191 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 SIGMAR1Q99720 223 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 ACANP16112 2415 aa11.33□□□□□ -0.6
BRCC3-201ENST00000330045 I3L3M4 83 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 J3QKU1 62 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 PSMB2P49721 201 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 UBE2D3P61077 147 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 UBE2D2P62837 147 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 GTSF1LQ9H1H1 148 aa11.32□□□□□ -0.6
BRCC3-201ENST00000330045 CFC1BP0CG36 223 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 CFC1P0CG37 223 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-201ENST00000330045 RNF152Q8N8N0 203 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 TMEM223A0PJW6 202 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 ELANEP08246 267 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 AZU1P20160 251 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 INSL3P51460 131 aa11.31□□□□□ -0.6
BRCC3-201ENST00000330045 FASNP49327 2511 aaKnown RBP11.3□□□□□ -0.6
BRCC3-201ENST00000330045 LEPROTO15243 131 aa11.3□□□□□ -0.6
BRCC3-201ENST00000330045 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
BRCC3-201ENST00000330045 WFDC11Q8NEX6 87 aa11.3□□□□□ -0.6
BRCC3-201ENST00000330045 J3QLI3 93 aa11.3□□□□□ -0.6
BRCC3-201ENST00000330045 SMCPP49901 116 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-201ENST00000330045 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
BRCC3-201ENST00000330045 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
BRCC3-201ENST00000330045 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
BRCC3-201ENST00000330045 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-201ENST00000330045 TCTEX1D4Q5JR98 221 aa11.29□□□□□ -0.6
BRCC3-201ENST00000330045 VCX2Q9H322 139 aa11.29□□□□□ -0.6
BRCC3-201ENST00000330045 SORL1Q92673 2214 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 IGLV4-3A0A075B6K6 122 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 RHODO00212 210 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
BRCC3-201ENST00000330045 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
BRCC3-201ENST00000330045 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
BRCC3-201ENST00000330045 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 HTN1P15515 57 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 ZNF702PQ9H963 129 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 NF1P21359 2839 aa11.28□□□□□ -0.6
BRCC3-201ENST00000330045 A0A0J9YXV3 536 aa11.27□□□□□ -0.61
BRCC3-201ENST00000330045 KNCNA6PVL3 124 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms