RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 DPM2O94777 84 aa12.37□□□□□ -0.43
SSR4-201ENST00000320857 COX8AP10176 69 aa12.37□□□□□ -0.43
SSR4-201ENST00000320857 KRTAP24-1Q3LI83 254 aa12.37□□□□□ -0.43
SSR4-201ENST00000320857 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
SSR4-201ENST00000320857 C1orf158Q8N1D5 194 aa12.37□□□□□ -0.43
SSR4-201ENST00000320857 A0A087WX48 190 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 TRAV12-1A0A0B4J245 112 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 IGKCP01834 107 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 PRM2P04554 102 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 MORN3Q6PF18 240 aaPredicted RBP12.36□□□□□ -0.43
SSR4-201ENST00000320857 ZFP2Q6ZN57 461 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 CYSLTR1Q9Y271 337 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 C2CD3Q4AC94 2353 aa12.36□□□□□ -0.43
SSR4-201ENST00000320857 RHODO00212 210 aa12.35□□□□□ -0.43
SSR4-201ENST00000320857 ANKRD39Q53RE8 183 aa12.35□□□□□ -0.43
SSR4-201ENST00000320857 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
SSR4-201ENST00000320857 ERASQ7Z444 233 aa12.35□□□□□ -0.43
SSR4-201ENST00000320857 STPG4Q8N801 248 aa12.35□□□□□ -0.43
SSR4-201ENST00000320857 IGHV3OR16-12A0A075B7B8 117 aa12.34□□□□□ -0.43
SSR4-201ENST00000320857 RIPPLY3P57055 190 aa12.34□□□□□ -0.43
SSR4-201ENST00000320857 RHOHQ15669 191 aa12.34□□□□□ -0.43
SSR4-201ENST00000320857 BATFQ16520 125 aa12.34□□□□□ -0.43
SSR4-201ENST00000320857 UFSP1Q6NVU6 142 aa12.34□□□□□ -0.43
SSR4-201ENST00000320857 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
SSR4-201ENST00000320857 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
SSR4-201ENST00000320857 A0A1B0GV90 55 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 I3L3M4 83 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 RS1O15537 224 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 AZU1P20160 251 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 PLNP26678 52 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
SSR4-201ENST00000320857 MRPL35Q9NZE8 188 aaKnown RBP12.32□□□□□ -0.44
SSR4-201ENST00000320857 TP53TG1Q9Y2A0 90 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
SSR4-201ENST00000320857 FBN1P35555 2871 aaKnown RBP12.31□□□□□ -0.44
SSR4-201ENST00000320857 F8VRH5 84 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 RPL35AP18077 110 aaKnown RBP12.31□□□□□ -0.44
SSR4-201ENST00000320857 INSL3P51460 131 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 IL17DQ8TAD2 202 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
SSR4-201ENST00000320857 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 CITED1Q99966 193 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
SSR4-201ENST00000320857 CHTOPQ9Y3Y2 248 aaKnown RBP12.31□□□□□ -0.44
SSR4-201ENST00000320857 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
SSR4-201ENST00000320857 RNASE8Q8TDE3 154 aaKnown RBP12.3□□□□□ -0.44
SSR4-201ENST00000320857 TNFRSF18Q9Y5U5 241 aa12.3□□□□□ -0.44
SSR4-201ENST00000320857 DLEU1O43261 78 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 TSHBP01222 138 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 GIG44P09565 113 aaPredicted RBP12.29□□□□□ -0.44
SSR4-201ENST00000320857 FGF6P10767 208 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 HINT1P49773 126 aaPredicted RBP12.29□□□□□ -0.44
SSR4-201ENST00000320857 TIMM17AQ99595 171 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 ATRQ13535 2644 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 IGIPA6NJ69 53 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 NMUP48645 174 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 C9orf66Q5T8R8 295 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 BOD1L2Q8IYS8 172 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
SSR4-201ENST00000320857 IGHV3-53P01767 116 aa12.28□□□□□ -0.44
SSR4-201ENST00000320857 ZC2HC1BQ5TFG8 222 aa12.28□□□□□ -0.44
SSR4-201ENST00000320857 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
SSR4-201ENST00000320857 TRGV1A0A0A0MS02 117 aa12.27□□□□□ -0.45
SSR4-201ENST00000320857 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.45
SSR4-201ENST00000320857 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
SSR4-201ENST00000320857 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
SSR4-201ENST00000320857 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
SSR4-201ENST00000320857 C16orf74Q96GX8 76 aa12.27□□□□□ -0.45
SSR4-201ENST00000320857 MDFIQ99750 246 aa12.27□□□□□ -0.45
SSR4-201ENST00000320857 SIVA1O15304 175 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 TCTAP57738 103 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 C12orf54Q6X4T0 127 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 P0DMU3 169 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 FAM231AP0DMU4 169 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 FAM231CP0DMU5 169 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 PMVKQ15126 192 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 Q6ZSN1 163 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
SSR4-201ENST00000320857 DAZ2Q13117 558 aaKnown RBP12.25□□□□□ -0.45
SSR4-201ENST00000320857 C20orf203Q8NBC4 194 aa12.25□□□□□ -0.45
SSR4-201ENST00000320857 PAPPA-AS1Q5QFB9 102 aa12.24□□□□□ -0.45
SSR4-201ENST00000320857 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
SSR4-201ENST00000320857 CSNK1G2-AS1Q8NCQ2 148 aa12.24□□□□□ -0.45
SSR4-201ENST00000320857 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
SSR4-201ENST00000320857 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
SSR4-201ENST00000320857 MPV17L2Q567V2 206 aa12.23□□□□□ -0.45
SSR4-201ENST00000320857 TMEM97Q5BJF2 176 aa12.23□□□□□ -0.45
SSR4-201ENST00000320857 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
SSR4-201ENST00000320857 CST9LQ9H4G1 147 aa12.22□□□□□ -0.45
SSR4-201ENST00000320857 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
SSR4-201ENST00000320857 Q6ZTI0 123 aa12.22□□□□□ -0.45
SSR4-201ENST00000320857 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
SSR4-201ENST00000320857 SPATA3Q8NHX4 192 aa12.2□□□□□ -0.46
SSR4-201ENST00000320857 OVOL2Q9BRP0 275 aa12.2□□□□□ -0.46
SSR4-201ENST00000320857 PLAC8L1A1L4L8 177 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 CIDEAO60543 219 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms