RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
TFE3-201ENST00000315869 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
TFE3-201ENST00000315869 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
TFE3-201ENST00000315869 RNF223E7ERA6 249 aa11.15□□□□□ -0.62
TFE3-201ENST00000315869 PRSS2P07478 247 aa11.15□□□□□ -0.62
TFE3-201ENST00000315869 ATRQ13535 2644 aa11.15□□□□□ -0.62
TFE3-201ENST00000315869 ADARB2-AS1A8MUL3 147 aa11.15□□□□□ -0.63
TFE3-201ENST00000315869 TSPAN13O95857 204 aa11.15□□□□□ -0.63
TFE3-201ENST00000315869 SOCS3O14543 225 aa11.14□□□□□ -0.63
TFE3-201ENST00000315869 CRYGDP07320 174 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 PAPPA-AS1Q5QFB9 102 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 TSHBP01222 138 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 RNASE13Q5GAN3 156 aaKnown RBP11.13□□□□□ -0.63
TFE3-201ENST00000315869 UNC79Q9P2D8 2635 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 J3QQQ9 107 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 IGHG2P01859 326 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 MSMBP08118 114 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
TFE3-201ENST00000315869 KNCNA6PVL3 124 aa11.12□□□□□ -0.63
TFE3-201ENST00000315869 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
TFE3-201ENST00000315869 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
TFE3-201ENST00000315869 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
TFE3-201ENST00000315869 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
TFE3-201ENST00000315869 A0A0J9YY99 117 aa11.12□□□□□ -0.63
TFE3-201ENST00000315869 Q8N1Y9 231 aa11.12□□□□□ -0.63
TFE3-201ENST00000315869 CIDEAO60543 219 aa11.11□□□□□ -0.63
TFE3-201ENST00000315869 VCX2Q9H322 139 aa11.11□□□□□ -0.63
TFE3-201ENST00000315869 NPC2P61916 151 aa11.11□□□□□ -0.63
TFE3-201ENST00000315869 ZNRF2Q8NHG8 242 aa11.11□□□□□ -0.63
TFE3-201ENST00000315869 SPXQ9BT56 116 aa11.11□□□□□ -0.63
TFE3-201ENST00000315869 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
TFE3-201ENST00000315869 FOXI1Q12951 378 aa11.1□□□□□ -0.63
TFE3-201ENST00000315869 NDUFA11Q86Y39 141 aa11.1□□□□□ -0.63
TFE3-201ENST00000315869 POLR2KP53803 58 aaKnown RBP11.1□□□□□ -0.63
TFE3-201ENST00000315869 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
TFE3-201ENST00000315869 A0A1B0GV72 72 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 IGIPA6NJ69 53 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 TCL1BO95988 128 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 IGHV4-59P01825 116 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 A8MWV9 139 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 PRM2P04554 102 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 LINC00315P59091 139 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 C1QTNF4Q9BXJ3 329 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
TFE3-201ENST00000315869 A4D1N5 150 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 SPINK8P0C7L1 97 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 CKS1BP61024 79 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 TMEM141Q96I45 108 aa11.09□□□□□ -0.63
TFE3-201ENST00000315869 C9JAW5 83 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 PRO1854Q9UHT4 67 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 A6NDX4 124 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 CFC1P0CG37 223 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 P0DMU3 169 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 FAM231AP0DMU4 169 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 FAM231CP0DMU5 169 aa11.08□□□□□ -0.64
TFE3-201ENST00000315869 KLLNB2CW77 178 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 CFAP126Q5VTH2 177 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
TFE3-201ENST00000315869 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 UBE2D1P51668 147 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 CD28P10747 220 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
TFE3-201ENST00000315869 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 NFE4Q86UQ8 179 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
TFE3-201ENST00000315869 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 A0A087WW49 117 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 KLK9Q2XQG4 91 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 C10orf126Q8N4M7 172 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 DCANP1Q8TF63 244 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 IGHV3-16A0A0C4DH30 117 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 B4DSR2 109 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 TRPT1Q86TN4 253 aaKnown RBP11.06□□□□□ -0.64
TFE3-201ENST00000315869 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
TFE3-201ENST00000315869 DEFB112Q30KQ8 113 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 PROK1P58294 105 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 CLUHP3Q96NS8 147 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 LINC01619G3V211 115 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 IGHV3-30P01768 117 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 MT-ATP8P03928 68 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 IGHV3-30-5P0DP03 117 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 MUSTN1Q8IVN3 82 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 SLC25A29Q8N8R3 303 aa11.05□□□□□ -0.64
TFE3-201ENST00000315869 F8P00451 2351 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 H3BUA1 57 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 M0QY20 66 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 A0A0J9YX75 114 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 PPDPFLQ8WWR9 84 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
TFE3-201ENST00000315869 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
TFE3-201ENST00000315869 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
TFE3-201ENST00000315869 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
TFE3-201ENST00000315869 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms