RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
SLC39A1-201ENST00000310483 RNF183Q96D59 192 aa11.67□□□□□ -0.54
SLC39A1-201ENST00000310483 IGHG2P01859 326 aa11.67□□□□□ -0.54
SLC39A1-201ENST00000310483 Q8N1Y9 231 aa11.67□□□□□ -0.54
SLC39A1-201ENST00000310483 CSMD2Q7Z408 3487 aa11.66□□□□□ -0.54
SLC39A1-201ENST00000310483 TRBV6-5A0A0K0K1A5 114 aa11.66□□□□□ -0.54
SLC39A1-201ENST00000310483 LEPROTO15243 131 aa11.66□□□□□ -0.54
SLC39A1-201ENST00000310483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.66□□□□□ -0.543e-9■■□□□ 13.8
SLC39A1-201ENST00000310483 IGHV4-39P01824 125 aa11.66□□□□□ -0.54
SLC39A1-201ENST00000310483 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
SLC39A1-201ENST00000310483 BEX4Q9NWD9 120 aaPredicted RBP11.66□□□□□ -0.54
SLC39A1-201ENST00000310483 C19orf84I3L1E1 186 aa11.65□□□□□ -0.54
SLC39A1-201ENST00000310483 RHODO00212 210 aa11.65□□□□□ -0.54
SLC39A1-201ENST00000310483 ERG28Q9UKR5 140 aa11.65□□□□□ -0.55
SLC39A1-201ENST00000310483 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 Q1RN00 199 aa11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 SPINK13Q1W4C9 94 aa11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 C10orf99Q6UWK7 81 aa11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 ID1P41134 155 aa11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 NSUN5P1Q3KNT7 163 aa11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
SLC39A1-201ENST00000310483 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 IGHV3-73A0A0B4J1V6 119 aa11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 A6NDX4 124 aa11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 SPXQ9BT56 116 aa11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 SPG11Q96JI7 2443 aa11.63□□□□□ -0.55
SLC39A1-201ENST00000310483 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 NCOR2Q9Y618 2525 aa11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 CSPG4Q6UVK1 2322 aa11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 VCX2Q9H322 139 aa11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 CHD8Q9HCK8 2581 aa11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 DOPEY2Q9Y3R5 2298 aa11.62□□□□□ -0.55
SLC39A1-201ENST00000310483 TRAV8-3A0A0A6YYJ7 113 aa11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 A0A0J9YXY3 114 aa11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 H3BUA1 57 aa11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 PROK1P58294 105 aa11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 ITPR1Q14643 2758 aa11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 RHOHQ15669 191 aa11.61□□□□□ -0.55
SLC39A1-201ENST00000310483 A0A0B4J2C4 111 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 A8MZ25 164 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 M0R2P5 195 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 Q6ZSV7 163 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 IGHV1OR15-1A0A075B7D0 117 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 A0A0J9YX75 114 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 CRLF1O75462 422 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 BRI3O95415 125 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 HTN1P15515 57 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 NPC2P61916 151 aa11.6□□□□□ -0.55
SLC39A1-201ENST00000310483 CUBNO60494 3623 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 I3L3M4 83 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 PRM2P04554 102 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 IGHV3-30-3P0DP02 117 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 Q9UF83 564 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 TEX49A0A1B0GTD5 131 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 TRIAP1O43715 76 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 ADAMTSL4-AS1Q5T5F5 129 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 ZFAND6Q6FIF0 208 aa11.59□□□□□ -0.55
SLC39A1-201ENST00000310483 PRSS2P07478 247 aa11.58□□□□□ -0.56
SLC39A1-201ENST00000310483 LINC01620Q4KN68 170 aa11.58□□□□□ -0.56
SLC39A1-201ENST00000310483 LITAFQ99732 161 aa11.58□□□□□ -0.56
SLC39A1-201ENST00000310483 CITED1Q99966 193 aa11.58□□□□□ -0.56
SLC39A1-201ENST00000310483 CFHR3Q02985 330 aa11.58□□□□□ -0.56
SLC39A1-201ENST00000310483 DUX5Q96PT3 197 aa11.58□□□□□ -0.56
SLC39A1-201ENST00000310483 TRAV4A0A0B4J268 109 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 K7EMT4 169 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 CD28P10747 220 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 LY6DQ14210 128 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 TEX29Q8N6K0 151 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 SVIPQ8NHG7 77 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 TMEM262E9PQX1 116 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 ATXN8Q156A1 80 aa11.57□□□□□ -0.56
SLC39A1-201ENST00000310483 AVPP01185 164 aa11.56□□□□□ -0.56
SLC39A1-201ENST00000310483 RBMY1A1P0DJD3 496 aaKnown RBP11.56□□□□□ -0.56
SLC39A1-201ENST00000310483 RBMY1CP0DJD4 496 aa11.56□□□□□ -0.56
SLC39A1-201ENST00000310483 RBMY1FQ15415 496 aaKnown RBP11.56□□□□□ -0.56
SLC39A1-201ENST00000310483 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
SLC39A1-201ENST00000310483 CREBBPQ92793 2442 aa11.56□□□□□ -0.56
SLC39A1-201ENST00000310483 UTP20O75691 2785 aaKnown RBP11.55□□□□□ -0.56
SLC39A1-201ENST00000310483 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
SLC39A1-201ENST00000310483 KNCNA6PVL3 124 aa11.55□□□□□ -0.56
SLC39A1-201ENST00000310483 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
SLC39A1-201ENST00000310483 ZANQ9Y493 2812 aa11.55□□□□□ -0.56
SLC39A1-201ENST00000310483 K7EQG2 157 aa11.54□□□□□ -0.56
SLC39A1-201ENST00000310483 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
SLC39A1-201ENST00000310483 SS18L2Q9UHA2 77 aa11.54□□□□□ -0.56
SLC39A1-201ENST00000310483 SYNJ2BPP57105 145 aa11.54□□□□□ -0.56
SLC39A1-201ENST00000310483 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
SLC39A1-201ENST00000310483 PSMB8P28062 276 aa11.53□□□□□ -0.56
SLC39A1-201ENST00000310483 ODF3Q96PU9 254 aa11.53□□□□□ -0.56
SLC39A1-201ENST00000310483 PIMREGQ9BSJ6 248 aa11.53□□□□□ -0.56
SLC39A1-201ENST00000310483 M0QXV9 152 aa11.52□□□□□ -0.56
SLC39A1-201ENST00000310483 CLEC2BQ92478 149 aa11.52□□□□□ -0.56
SLC39A1-201ENST00000310483 TRBV30A0A0K0K1B3 111 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms