RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DKK2Q9UBU2 259 aa15.41■□□□□ 0.06
ATG4D-201ENST00000309469 IGHV3-73A0A0B4J1V6 119 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 TRBV27A0A0K0K1C4 114 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 ODF1Q14990 250 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 C9orf66Q5T8R8 295 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 CFAP126Q5VTH2 177 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 KIR2DL4Q99706 377 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 EDA2RQ9HAV5 297 aa15.4■□□□□ 0.06
ATG4D-201ENST00000309469 H7C1H1 209 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 C1QTNF4Q9BXJ3 329 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 GAGE1Q13065 139 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 C2orf66Q6UXQ4 117 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 IL17DQ8TAD2 202 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 RNASE8Q8TDE3 154 aaKnown RBP15.39■□□□□ 0.05
ATG4D-201ENST00000309469 SCGB3A1Q96QR1 104 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 TP73-AS1Q9UF72 201 aa15.39■□□□□ 0.05
ATG4D-201ENST00000309469 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-201ENST00000309469 ZFP2Q6ZN57 461 aa15.38■□□□□ 0.05
ATG4D-201ENST00000309469 G0S2P27469 103 aa15.37■□□□□ 0.05
ATG4D-201ENST00000309469 COX8AP10176 69 aa15.37■□□□□ 0.05
ATG4D-201ENST00000309469 ANKRD39Q53RE8 183 aa15.37■□□□□ 0.05
ATG4D-201ENST00000309469 STPG4Q8N801 248 aa15.37■□□□□ 0.05
ATG4D-201ENST00000309469 TMEM263Q8WUH6 116 aaKnown RBP15.37■□□□□ 0.05
ATG4D-201ENST00000309469 ZMAT4Q9H898 229 aa15.37■□□□□ 0.05
ATG4D-201ENST00000309469 RHODO00212 210 aa15.36■□□□□ 0.05
ATG4D-201ENST00000309469 RS1O15537 224 aa15.36■□□□□ 0.05
ATG4D-201ENST00000309469 GTSCR1Q86UQ5 136 aa15.36■□□□□ 0.05
ATG4D-201ENST00000309469 CSNK1G2-AS1Q8NCQ2 148 aa15.36■□□□□ 0.05
ATG4D-201ENST00000309469 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
ATG4D-201ENST00000309469 CYSLTR1Q9Y271 337 aa15.35■□□□□ 0.05
ATG4D-201ENST00000309469 FLNBO75369 2602 aaKnown RBP15.34■□□□□ 0.05
ATG4D-201ENST00000309469 Q6ZSN1 163 aa15.34■□□□□ 0.05
ATG4D-201ENST00000309469 IGKCP01834 107 aa15.33■□□□□ 0.05
ATG4D-201ENST00000309469 COL5A1-AS1Q5SY13 56 aa15.33■□□□□ 0.05
ATG4D-201ENST00000309469 ERASQ7Z444 233 aa15.33■□□□□ 0.05
ATG4D-201ENST00000309469 A0A087WX48 190 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 TRGV1A0A0A0MS02 117 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 LINC01549A6NIU2 74 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 I3L3M4 83 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 DPM2O94777 84 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 P0DMU3 169 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 FAM231AP0DMU4 169 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 FAM231CP0DMU5 169 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 HINT1P49773 126 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-201ENST00000309469 RIPPLY3P57055 190 aa15.33■□□□□ 0.04
ATG4D-201ENST00000309469 TP53TG1Q9Y2A0 90 aa15.32■□□□□ 0.04
ATG4D-201ENST00000309469 TRAV12-1A0A0B4J245 112 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 DLEU1O43261 78 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 C16orf74Q96GX8 76 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 TSHBP01222 138 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 IGHV3-53P01767 116 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 ZNF25P17030 456 aaPredicted RBP15.31■□□□□ 0.04
ATG4D-201ENST00000309469 TCTAP57738 103 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 RHOHQ15669 191 aa15.31■□□□□ 0.04
ATG4D-201ENST00000309469 MRPL35Q9NZE8 188 aaKnown RBP15.31■□□□□ 0.04
ATG4D-201ENST00000309469 DAZ2Q13117 558 aaKnown RBP15.3■□□□□ 0.04
ATG4D-201ENST00000309469 NEXN-AS1Q8NBZ9 246 aa15.3■□□□□ 0.04
ATG4D-201ENST00000309469 HHLA3Q9XRX5 114 aa15.3■□□□□ 0.04
ATG4D-201ENST00000309469 TNFRSF18Q9Y5U5 241 aa15.3■□□□□ 0.04
ATG4D-201ENST00000309469 TENM1Q9UKZ4 2725 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 FGF6P10767 208 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 WFDC9Q8NEX5 89 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 OR4C5Q8NGB2 326 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 BAALCQ8WXS3 180 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 F8P00451 2351 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 IGIPA6NJ69 53 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 RPL39P62891 51 aaKnown RBP15.29■□□□□ 0.04
ATG4D-201ENST00000309469 Q6ZTI0 123 aa15.29■□□□□ 0.04
ATG4D-201ENST00000309469 NOP10Q9NPE3 64 aaKnown RBP15.29■□□□□ 0.04
ATG4D-201ENST00000309469 PLAC8L1A1L4L8 177 aa15.28■□□□□ 0.04
ATG4D-201ENST00000309469 RRN3P1Q2M238 152 aa15.28■□□□□ 0.04
ATG4D-201ENST00000309469 Q9UF83 564 aa15.28■□□□□ 0.04
ATG4D-201ENST00000309469 NMUP48645 174 aa15.27■□□□□ 0.04
ATG4D-201ENST00000309469 BOD1L2Q8IYS8 172 aa15.27■□□□□ 0.04
ATG4D-201ENST00000309469 JMJD1CQ15652 2540 aa15.27■□□□□ 0.04
ATG4D-201ENST00000309469 PLNP26678 52 aa15.27■□□□□ 0.03
ATG4D-201ENST00000309469 C2orf91Q6ZV80 131 aa15.27■□□□□ 0.03
ATG4D-201ENST00000309469 TMEM141Q96I45 108 aa15.27■□□□□ 0.03
ATG4D-201ENST00000309469 DNAJC30Q96LL9 226 aa15.27■□□□□ 0.03
ATG4D-201ENST00000309469 NACAE9PAV3 2078 aa15.26■□□□□ 0.03
ATG4D-201ENST00000309469 F8VRH5 84 aa15.26■□□□□ 0.03
ATG4D-201ENST00000309469 MPV17L2Q567V2 206 aa15.26■□□□□ 0.03
ATG4D-201ENST00000309469 CHTOPQ9Y3Y2 248 aaKnown RBP15.26■□□□□ 0.03
ATG4D-201ENST00000309469 ZC2HC1BQ5TFG8 222 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 ZNF479Q96JC4 524 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 TIMM17AQ99595 171 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 TRAV4A0A0B4J268 109 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 PRSS29PA6NIE9 313 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 C20orf203Q8NBC4 194 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 OVOL2Q9BRP0 275 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 VWFP04275 2813 aa15.25■□□□□ 0.03
ATG4D-201ENST00000309469 KRTAP24-1Q3LI83 254 aa15.24■□□□□ 0.03
ATG4D-201ENST00000309469 C12orf54Q6X4T0 127 aa15.24■□□□□ 0.03
ATG4D-201ENST00000309469 PCP2Q8IVA1 136 aa15.23■□□□□ 0.03
ATG4D-201ENST00000309469 TEP1Q99973 2627 aaKnown RBP15.23■□□□□ 0.03
ATG4D-201ENST00000309469 IGKV2D-26A0A0A0MRZ7 120 aa15.22■□□□□ 0.03
ATG4D-201ENST00000309469 BVES-AS1Q5T3Y7 98 aa15.21■□□□□ 0.03
ATG4D-201ENST00000309469 GAGE12BA1L429 117 aa15.21■□□□□ 0.02
ATG4D-201ENST00000309469 CYSRT1A8MQ03 144 aa15.21■□□□□ 0.02
ATG4D-201ENST00000309469 GAGE7O76087 117 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms