RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 TGFAP01135 160 aa15.42■□□□□ 0.06
RELA-201ENST00000308639 GATA3P23771 443 aa15.42■□□□□ 0.06
RELA-201ENST00000308639 PTPN13Q12923 2485 aa15.42■□□□□ 0.06
RELA-201ENST00000308639 C18orf65Q6ZTR6 163 aa15.42■□□□□ 0.06
RELA-201ENST00000308639 RNF183Q96D59 192 aa15.42■□□□□ 0.06
RELA-201ENST00000308639 IGHV3-73A0A0B4J1V6 119 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 SNRPD3P62318 126 aaKnown RBP15.41■□□□□ 0.06
RELA-201ENST00000308639 FOXI1Q12951 378 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 DEFB136Q30KP8 78 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 TEX15Q9BXT5 2789 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 M0QY20 66 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 LGALS9O00182 355 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 HOXA3O43365 443 aaPredicted RBP15.41■□□□□ 0.06
RELA-201ENST00000308639 SS18L2Q9UHA2 77 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 MYO9AB2RTY4 2548 aa15.41■□□□□ 0.06
RELA-201ENST00000308639 LINC01549A6NIU2 74 aa15.4■□□□□ 0.06
RELA-201ENST00000308639 MT-ATP8P03928 68 aa15.4■□□□□ 0.06
RELA-201ENST00000308639 TLN2Q9Y4G6 2542 aa15.4■□□□□ 0.06
RELA-201ENST00000308639 IGHV3-64A0A075B6Q5 118 aa15.4■□□□□ 0.06
RELA-201ENST00000308639 IGHV1OR15-1A0A075B7D0 117 aa15.4■□□□□ 0.06
RELA-201ENST00000308639 RBMY1A1P0DJD3 496 aaKnown RBP15.4■□□□□ 0.06
RELA-201ENST00000308639 RBMY1CP0DJD4 496 aa15.4■□□□□ 0.06
RELA-201ENST00000308639 RBMY1FQ15415 496 aaKnown RBP15.4■□□□□ 0.06
RELA-201ENST00000308639 TRBV27A0A0K0K1C4 114 aa15.39■□□□□ 0.05
RELA-201ENST00000308639 KNCNA6PVL3 124 aa15.39■□□□□ 0.05
RELA-201ENST00000308639 ZNF876PQ49A33 203 aa15.39■□□□□ 0.05
RELA-201ENST00000308639 P0DMU3 169 aa15.39■□□□□ 0.05
RELA-201ENST00000308639 FAM231AP0DMU4 169 aa15.39■□□□□ 0.05
RELA-201ENST00000308639 FAM231CP0DMU5 169 aa15.39■□□□□ 0.05
RELA-201ENST00000308639 HOXD3P31249 432 aaPredicted RBP15.39■□□□□ 0.05
RELA-201ENST00000308639 ZNF462Q96JM2 2506 aa15.38■□□□□ 0.05
RELA-201ENST00000308639 LINC01619G3V211 115 aa15.38■□□□□ 0.05
RELA-201ENST00000308639 PROK1P58294 105 aa15.38■□□□□ 0.05
RELA-201ENST00000308639 C1QTNF4Q9BXJ3 329 aa15.38■□□□□ 0.05
RELA-201ENST00000308639 BEX4Q9NWD9 120 aaPredicted RBP15.38■□□□□ 0.05
RELA-201ENST00000308639 RPL32P62910 135 aaKnown RBP15.38■□□□□ 0.05
RELA-201ENST00000308639 Q6ZUT4 128 aa15.38■□□□□ 0.05
RELA-201ENST00000308639 A0A0J9YY99 117 aa15.37■□□□□ 0.05
RELA-201ENST00000308639 LINC01356Q8N9X3 169 aa15.37■□□□□ 0.05
RELA-201ENST00000308639 DUX3Q96PT4 197 aa15.37■□□□□ 0.05
RELA-201ENST00000308639 ZNF580Q9UK33 172 aa15.37■□□□□ 0.05
RELA-201ENST00000308639 PRB1P04280 392 aa15.36■□□□□ 0.05
RELA-201ENST00000308639 ATP6V0E2Q8NHE4 81 aa15.36■□□□□ 0.05
RELA-201ENST00000308639 TIMM17AQ99595 171 aa15.36■□□□□ 0.05
RELA-201ENST00000308639 ZNF469Q96JG9 3925 aaPredicted RBP15.36■□□□□ 0.05
RELA-201ENST00000308639 XGP55808 180 aa15.36■□□□□ 0.05
RELA-201ENST00000308639 Q9UF83 564 aa15.36■□□□□ 0.05
RELA-201ENST00000308639 USP24Q9UPU5 2620 aa15.36■□□□□ 0.05
RELA-201ENST00000308639 SLURP1P55000 103 aa15.35■□□□□ 0.05
RELA-201ENST00000308639 TMEM141Q96I45 108 aa15.35■□□□□ 0.05
RELA-201ENST00000308639 A0A096LNT2 108 aa15.35■□□□□ 0.05
RELA-201ENST00000308639 LOC107984156A0A0G2JMH3 177 aa15.35■□□□□ 0.05
RELA-201ENST00000308639 TRBV6-5A0A0K0K1A5 114 aa15.35■□□□□ 0.05
RELA-201ENST00000308639 ARL17AQ8IVW1 177 aa15.35■□□□□ 0.05
RELA-201ENST00000308639 HERVK_113P61574 105 aa15.34■□□□□ 0.05
RELA-201ENST00000308639 FHL3Q13643 280 aa15.34■□□□□ 0.05
RELA-201ENST00000308639 UBE2D1P51668 147 aa15.33■□□□□ 0.05
RELA-201ENST00000308639 ANAPC13Q9BS18 74 aa15.33■□□□□ 0.05
RELA-201ENST00000308639 ZNF702PQ9H963 129 aa15.33■□□□□ 0.05
RELA-201ENST00000308639 GAGE5Q13069 117 aa15.33■□□□□ 0.04
RELA-201ENST00000308639 GAGE6Q13070 117 aa15.33■□□□□ 0.04
RELA-201ENST00000308639 ODF3Q96PU9 254 aa15.33■□□□□ 0.04
RELA-201ENST00000308639 NFE4Q86UQ8 179 aa15.32■□□□□ 0.04
RELA-201ENST00000308639 AMELXQ99217 191 aa15.32■□□□□ 0.04
RELA-201ENST00000308639 CEMP1Q6PRD7 247 aaPredicted RBP15.32■□□□□ 0.04
RELA-201ENST00000308639 NAV2Q8IVL1 2488 aa15.32■□□□□ 0.04
RELA-201ENST00000308639 RNASE13Q5GAN3 156 aaKnown RBP15.31■□□□□ 0.04
RELA-201ENST00000308639 CFAP126Q5VTH2 177 aa15.31■□□□□ 0.04
RELA-201ENST00000308639 TRPT1Q86TN4 253 aaKnown RBP15.31■□□□□ 0.04
RELA-201ENST00000308639 VPREB3Q9UKI3 123 aa15.31■□□□□ 0.04
RELA-201ENST00000308639 J3QQQ9 107 aa15.31■□□□□ 0.04
RELA-201ENST00000308639 SMCPP49901 116 aaPredicted RBP15.31■□□□□ 0.04
RELA-201ENST00000308639 DEFB131AP59861 70 aa15.31■□□□□ 0.04
RELA-201ENST00000308639 A0A0J9YXV3 536 aa15.3■□□□□ 0.04
RELA-201ENST00000308639 PSMB2P49721 201 aa15.3■□□□□ 0.04
RELA-201ENST00000308639 PAPPA-AS1Q5QFB9 102 aa15.3■□□□□ 0.04
RELA-201ENST00000308639 SONP18583 2426 aaKnown RBP15.3■□□□□ 0.04
RELA-201ENST00000308639 IGHV3-30P01768 117 aa15.3■□□□□ 0.04
RELA-201ENST00000308639 IGHV3-30-5P0DP03 117 aa15.3■□□□□ 0.04
RELA-201ENST00000308639 C20orf203Q8NBC4 194 aa15.3■□□□□ 0.04
RELA-201ENST00000308639 RBMY1BA6NDE4 496 aaKnown RBP15.29■□□□□ 0.04
RELA-201ENST00000308639 RBMY1EA6NEQ0 496 aaKnown RBP15.29■□□□□ 0.04
RELA-201ENST00000308639 RBMY1DP0C7P1 496 aaKnown RBP15.29■□□□□ 0.04
RELA-201ENST00000308639 NSUN5P1Q3KNT7 163 aa15.29■□□□□ 0.04
RELA-201ENST00000308639 NDUFA11Q86Y39 141 aa15.29■□□□□ 0.04
RELA-201ENST00000308639 WNK1Q9H4A3 2382 aa15.29■□□□□ 0.04
RELA-201ENST00000308639 SHISA2Q6UWI4 295 aa15.29■□□□□ 0.04
RELA-201ENST00000308639 EPG5Q9HCE0 2579 aa15.28■□□□□ 0.04
RELA-201ENST00000308639 CHD6Q8TD26 2715 aa15.28■□□□□ 0.04
RELA-201ENST00000308639 NACAE9PAV3 2078 aa15.28■□□□□ 0.04
RELA-201ENST00000308639 CFC1BP0CG36 223 aa15.28■□□□□ 0.04
RELA-201ENST00000308639 CFC1P0CG37 223 aa15.28■□□□□ 0.04
RELA-201ENST00000308639 KRTAP10-9P60411 292 aa15.28■□□□□ 0.04
RELA-201ENST00000308639 LGALS3P17931 250 aaKnown RBP15.28■□□□□ 0.04
RELA-201ENST00000308639 ADARB2-AS1A8MUL3 147 aa15.27■□□□□ 0.04
RELA-201ENST00000308639 B5MCH6 92 aa15.27■□□□□ 0.04
RELA-201ENST00000308639 I3L3M4 83 aa15.27■□□□□ 0.04
RELA-201ENST00000308639 SLC25A29Q8N8R3 303 aa15.27■□□□□ 0.04
RELA-201ENST00000308639 PTH2Q96A98 100 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms