RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 J3QQQ9 107 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 IGHV3-30P01768 117 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 MT-ATP8P03928 68 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 IGHV3-30-5P0DP03 117 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 CRIP2P52943 208 aaPredicted RBP12.32□□□□□ -0.44
SSH3-201ENST00000308127 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
SSH3-201ENST00000308127 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
SSH3-201ENST00000308127 Q9UF83 564 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 A0A0J9YXV3 536 aa12.31□□□□□ -0.44
SSH3-201ENST00000308127 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
SSH3-201ENST00000308127 NPC2P61916 151 aa12.31□□□□□ -0.44
SSH3-201ENST00000308127 CARD19Q96LW7 228 aa12.31□□□□□ -0.44
SSH3-201ENST00000308127 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
SSH3-201ENST00000308127 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
SSH3-201ENST00000308127 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
SSH3-201ENST00000308127 USMG5Q96IX5 58 aa12.31□□□□□ -0.44
SSH3-201ENST00000308127 A4D1N5 150 aa12.3□□□□□ -0.44
SSH3-201ENST00000308127 A6NDX4 124 aa12.3□□□□□ -0.44
SSH3-201ENST00000308127 CDIP1Q9H305 208 aa12.3□□□□□ -0.44
SSH3-201ENST00000308127 AKAP9Q99996 3911 aa12.3□□□□□ -0.44
SSH3-201ENST00000308127 IGHV4OR15-8A0A075B7B6 117 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 A0A087WW49 117 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 LINC01619G3V211 115 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 IGHV4-59P01825 116 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 SYNJ2BPP57105 145 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 APRG1Q8IVJ8 170 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 A8MZ25 164 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 ATP5J2P56134 94 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 AMELXQ99217 191 aa12.29□□□□□ -0.44
SSH3-201ENST00000308127 NXPH4O95158 308 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 ELANEP08246 267 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 UBE2D3P61077 147 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 UBE2D2P62837 147 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 PIMREGQ9BSJ6 248 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 SPXQ9BT56 116 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 PRRC2AP48634 2157 aaKnown RBP12.28□□□□□ -0.44
SSH3-201ENST00000308127 M0QY20 66 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 PPP1R17O96001 155 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 XGP55808 180 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 CCL19Q99731 98 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 NAV2Q8IVL1 2488 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 ID1P41134 155 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 CKS1BP61024 79 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
SSH3-201ENST00000308127 SPINK8P0C7L1 97 aa12.27□□□□□ -0.45
SSH3-201ENST00000308127 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
SSH3-201ENST00000308127 IGLV1-40P01703 118 aa12.27□□□□□ -0.45
SSH3-201ENST00000308127 Q1RN00 199 aa12.27□□□□□ -0.45
SSH3-201ENST00000308127 ANKRD29Q8N6D5 301 aa12.27□□□□□ -0.45
SSH3-201ENST00000308127 UCNP55089 124 aa12.26□□□□□ -0.45
SSH3-201ENST00000308127 Q6ZSV7 163 aa12.26□□□□□ -0.45
SSH3-201ENST00000308127 MUSTN1Q8IVN3 82 aa12.26□□□□□ -0.45
SSH3-201ENST00000308127 C10orf126Q8N4M7 172 aa12.26□□□□□ -0.45
SSH3-201ENST00000308127 CCDC168Q8NDH2 2452 aa12.26□□□□□ -0.45
SSH3-201ENST00000308127 TRBV27A0A0K0K1C4 114 aa12.26□□□□□ -0.45
SSH3-201ENST00000308127 C9JAW5 83 aa12.25□□□□□ -0.45
SSH3-201ENST00000308127 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
SSH3-201ENST00000308127 PRO1854Q9UHT4 67 aa12.25□□□□□ -0.45
SSH3-201ENST00000308127 DEFB136Q30KP8 78 aa12.25□□□□□ -0.45
SSH3-201ENST00000308127 POM121L12Q8N7R1 296 aa12.25□□□□□ -0.45
SSH3-201ENST00000308127 TMEM141Q96I45 108 aa12.25□□□□□ -0.45
SSH3-201ENST00000308127 LGALS9O00182 355 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 CIDEAO60543 219 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 PRSS2P07478 247 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 C10orf105Q8TEF2 133 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 CLUHP3Q96NS8 147 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 A0A0J9YX75 114 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
SSH3-201ENST00000308127 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 ZNF22P17026 224 aaPredicted RBP12.24□□□□□ -0.45
SSH3-201ENST00000308127 RBMY1FQ15415 496 aaKnown RBP12.24□□□□□ -0.45
SSH3-201ENST00000308127 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 DUX3Q96PT4 197 aa12.24□□□□□ -0.45
SSH3-201ENST00000308127 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
SSH3-201ENST00000308127 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
SSH3-201ENST00000308127 MSMBP08118 114 aa12.23□□□□□ -0.45
SSH3-201ENST00000308127 DEFB112Q30KQ8 113 aa12.23□□□□□ -0.45
SSH3-201ENST00000308127 PAPPA-AS1Q5QFB9 102 aa12.23□□□□□ -0.45
SSH3-201ENST00000308127 VCX2Q9H322 139 aa12.23□□□□□ -0.45
SSH3-201ENST00000308127 A8MWV9 139 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 TEN1Q86WV5 123 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 IGLV4-3A0A075B6K6 122 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 A0A1B0GV72 72 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 TMEM223A0PJW6 202 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 C18orf65Q6ZTR6 163 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 Q6ZUT4 128 aa12.22□□□□□ -0.45
SSH3-201ENST00000308127 RHODO00212 210 aa12.21□□□□□ -0.45
SSH3-201ENST00000308127 SNRPD3P62318 126 aaKnown RBP12.21□□□□□ -0.45
SSH3-201ENST00000308127 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.45
SSH3-201ENST00000308127 CD28P10747 220 aa12.2□□□□□ -0.46
SSH3-201ENST00000308127 CFHR3Q02985 330 aa12.2□□□□□ -0.46
SSH3-201ENST00000308127 DAND5Q8N907 189 aa12.2□□□□□ -0.46
SSH3-201ENST00000308127 PPDPFLQ8WWR9 84 aa12.2□□□□□ -0.46
SSH3-201ENST00000308127 TRAV26-1A0A087WT03 109 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms