RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 VCYO14598 125 aa13.72□□□□□ -0.21
RNF139-201ENST00000303545 C4orf3Q8WVX3 66 aa13.72□□□□□ -0.21
RNF139-201ENST00000303545 H3BMM0 161 aa13.71□□□□□ -0.21
RNF139-201ENST00000303545 H3BRM9 83 aa13.71□□□□□ -0.21
RNF139-201ENST00000303545 CD300EQ496F6 205 aaPredicted RBP13.71□□□□□ -0.22
RNF139-201ENST00000303545 ESM1Q9NQ30 184 aa13.71□□□□□ -0.22
RNF139-201ENST00000303545 NOTCH3Q9UM47 2321 aa13.71□□□□□ -0.22
RNF139-201ENST00000303545 C9orf118A6NHY6 69 aa13.7□□□□□ -0.22
RNF139-201ENST00000303545 PEMTQ9UBM1 199 aa13.7□□□□□ -0.22
RNF139-201ENST00000303545 NHP2Q9NX24 153 aaKnown RBP13.69□□□□□ -0.22
RNF139-201ENST00000303545 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
RNF139-201ENST00000303545 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
RNF139-201ENST00000303545 MAP6D1Q9H9H5 199 aa13.69□□□□□ -0.22
RNF139-201ENST00000303545 HIGD1BQ9P298 99 aa13.69□□□□□ -0.22
RNF139-201ENST00000303545 Q9UF83 564 aa13.69□□□□□ -0.22
RNF139-201ENST00000303545 IGIPA6NJ69 53 aa13.68□□□□□ -0.22
RNF139-201ENST00000303545 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
RNF139-201ENST00000303545 GAGE10A6NGK3 116 aa13.68□□□□□ -0.22
RNF139-201ENST00000303545 C11orf86A6NJI1 115 aa13.68□□□□□ -0.22
RNF139-201ENST00000303545 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
RNF139-201ENST00000303545 HELZ2Q9BYK8 2649 aaKnown RBP13.68□□□□□ -0.22
RNF139-201ENST00000303545 TRGV11A0A075B6L2 103 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 CEND1Q8N111 149 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 TRBV27A0A0K0K1C4 114 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 HIST1H4GQ99525 98 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
RNF139-201ENST00000303545 IGLV4-69A0A075B6H9 119 aa13.66□□□□□ -0.22
RNF139-201ENST00000303545 SMIM13P0DJ93 91 aa13.66□□□□□ -0.22
RNF139-201ENST00000303545 CD28P10747 220 aa13.66□□□□□ -0.22
RNF139-201ENST00000303545 NACAE9PAV3 2078 aa13.66□□□□□ -0.22
RNF139-201ENST00000303545 IGHV3OR16-12A0A075B7B8 117 aa13.65□□□□□ -0.22
RNF139-201ENST00000303545 MYMXA0A1B0GTQ4 84 aa13.65□□□□□ -0.22
RNF139-201ENST00000303545 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
RNF139-201ENST00000303545 SETXQ7Z333 2677 aaKnown RBP13.65□□□□□ -0.23
RNF139-201ENST00000303545 RPL32P62910 135 aaKnown RBP13.64□□□□□ -0.23
RNF139-201ENST00000303545 LINC01587Q99440 93 aa13.64□□□□□ -0.23
RNF139-201ENST00000303545 PMVKQ15126 192 aa13.64□□□□□ -0.23
RNF139-201ENST00000303545 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
RNF139-201ENST00000303545 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
RNF139-201ENST00000303545 TRBV6-5A0A0K0K1A5 114 aa13.63□□□□□ -0.23
RNF139-201ENST00000303545 ZNF815PA8K554 130 aa13.63□□□□□ -0.23
RNF139-201ENST00000303545 SCGB2A2Q13296 93 aa13.63□□□□□ -0.23
RNF139-201ENST00000303545 TMEM170BQ5T4T1 132 aa13.63□□□□□ -0.23
RNF139-201ENST00000303545 Q6ZSN1 163 aa13.63□□□□□ -0.23
RNF139-201ENST00000303545 YAE1D1Q9NRH1 226 aa13.63□□□□□ -0.23
RNF139-201ENST00000303545 ANK3Q12955 4377 aaKnown RBP13.63□□□□□ -0.23
RNF139-201ENST00000303545 K7ERU9 68 aa13.62□□□□□ -0.23
RNF139-201ENST00000303545 ZNRF2Q8NHG8 242 aa13.62□□□□□ -0.23
RNF139-201ENST00000303545 SPAG8Q99932 426 aaPredicted RBP13.62□□□□□ -0.23
RNF139-201ENST00000303545 E9PLD3 99 aa13.62□□□□□ -0.23
RNF139-201ENST00000303545 MRPL16Q9NX20 251 aaKnown RBP13.62□□□□□ -0.23
RNF139-201ENST00000303545 A0A1W2PPM0 123 aa13.61□□□□□ -0.23
RNF139-201ENST00000303545 RIPPLY3P57055 190 aa13.61□□□□□ -0.23
RNF139-201ENST00000303545 SAMD5Q5TGI4 173 aa13.61□□□□□ -0.23
RNF139-201ENST00000303545 CITED2Q99967 270 aaPredicted RBP13.61□□□□□ -0.23
RNF139-201ENST00000303545 CEMP1Q6PRD7 247 aaPredicted RBP13.6□□□□□ -0.23
RNF139-201ENST00000303545 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 TM2D2Q9BX73 214 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 IGHV3-64A0A075B6Q5 118 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 I3L3M4 83 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 SAP30O75446 220 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 SPCS1Q9Y6A9 102 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 CCL24O00175 119 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 AZU1P20160 251 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 ODF3L2Q3SX64 289 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 RNASE13Q5GAN3 156 aaKnown RBP13.6□□□□□ -0.23
RNF139-201ENST00000303545 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 TIMM17AQ99595 171 aa13.6□□□□□ -0.23
RNF139-201ENST00000303545 K7EP34 96 aa13.59□□□□□ -0.23
RNF139-201ENST00000303545 UFSP1Q6NVU6 142 aa13.59□□□□□ -0.23
RNF139-201ENST00000303545 PHLDA1Q8WV24 401 aaPredicted RBP13.59□□□□□ -0.23
RNF139-201ENST00000303545 TSPEAR-AS2P59090 65 aa13.59□□□□□ -0.23
RNF139-201ENST00000303545 M0R2P5 195 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 KRTAP1-1Q07627 177 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 GTF2H5Q6ZYL4 71 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 FASNP49327 2511 aaKnown RBP13.58□□□□□ -0.24
RNF139-201ENST00000303545 TRBV7-3A0A075B6L6 115 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 IGHV3-38A0A0C4DH36 116 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 TMEM86BQ8N661 226 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 C20orf203Q8NBC4 194 aa13.58□□□□□ -0.24
RNF139-201ENST00000303545 A8MTW9 85 aa13.57□□□□□ -0.24
RNF139-201ENST00000303545 FABP2P12104 132 aa13.57□□□□□ -0.24
RNF139-201ENST00000303545 ZNF415Q09FC8 603 aa13.57□□□□□ -0.24
RNF139-201ENST00000303545 NSUN5P1Q3KNT7 163 aa13.57□□□□□ -0.24
RNF139-201ENST00000303545 UNC79Q9P2D8 2635 aa13.57□□□□□ -0.24
RNF139-201ENST00000303545 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
RNF139-201ENST00000303545 CFAP126Q5VTH2 177 aa13.56□□□□□ -0.24
RNF139-201ENST00000303545 TNFRSF18Q9Y5U5 241 aa13.56□□□□□ -0.24
RNF139-201ENST00000303545 INSP01308 110 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 RHOHQ15669 191 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 STHQ8IWL8 128 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 SMR3AQ99954 134 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 TRAV2A0A0B4J234 112 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 WFDC10AQ9H1F0 79 aa13.55□□□□□ -0.24
RNF139-201ENST00000303545 A0A0J9YXV3 536 aa13.54□□□□□ -0.24
RNF139-201ENST00000303545 SRSF9Q13242 221 aaKnown RBP eCLIP13.54□□□□□ -0.24
RNF139-201ENST00000303545 LINC01006Q8NI28 216 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms