RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 IGLC6P0CF74 106 aa16.01■□□□□ 0.15
LETM1-201ENST00000302787 RPL18AQ02543 176 aaKnown RBP16.01■□□□□ 0.15
LETM1-201ENST00000302787 ZMAT4Q9H898 229 aa16.01■□□□□ 0.15
LETM1-201ENST00000302787 UBE2BP63146 152 aa16.01■□□□□ 0.15
LETM1-201ENST00000302787 C22orf34Q6ZV56 151 aa16■□□□□ 0.15
LETM1-201ENST00000302787 MBD6Q96DN6 1003 aa16■□□□□ 0.15
LETM1-201ENST00000302787 ALPK3Q96L96 1907 aa16■□□□□ 0.15
LETM1-201ENST00000302787 LGALS9O00182 355 aa16■□□□□ 0.15
LETM1-201ENST00000302787 TMEM61Q8N0U2 210 aa16■□□□□ 0.15
LETM1-201ENST00000302787 MRAPQ8TCY5 172 aa16■□□□□ 0.15
LETM1-201ENST00000302787 CLEC2BQ92478 149 aa16■□□□□ 0.15
LETM1-201ENST00000302787 TRBV10-2A0A0K0K1G8 114 aa15.99■□□□□ 0.15
LETM1-201ENST00000302787 LMO4P61968 165 aa15.99■□□□□ 0.15
LETM1-201ENST00000302787 YPEL4Q96NS1 127 aa15.98■□□□□ 0.15
LETM1-201ENST00000302787 CRYGBP07316 175 aa15.98■□□□□ 0.15
LETM1-201ENST00000302787 SS18L2Q9UHA2 77 aa15.98■□□□□ 0.15
LETM1-201ENST00000302787 ETDCA0A1B0GVM5 59 aa15.97■□□□□ 0.15
LETM1-201ENST00000302787 COL4A4P53420 1690 aaPredicted RBP15.97■□□□□ 0.15
LETM1-201ENST00000302787 TECTAO75443 2155 aa15.97■□□□□ 0.15
LETM1-201ENST00000302787 MYCNOSP40205 109 aa15.96■□□□□ 0.15
LETM1-201ENST00000302787 CEMP1Q6PRD7 247 aaPredicted RBP15.96■□□□□ 0.15
LETM1-201ENST00000302787 NDUFA11Q86Y39 141 aa15.96■□□□□ 0.15
LETM1-201ENST00000302787 TP53TG3Q9ULZ0 132 aa15.96■□□□□ 0.15
LETM1-201ENST00000302787 G3V4G9 280 aa15.96■□□□□ 0.15
LETM1-201ENST00000302787 PCDH15Q96QU1 1955 aa15.96■□□□□ 0.15
LETM1-201ENST00000302787 IGKV3D-7A0A0C4DH55 119 aa15.96■□□□□ 0.15
LETM1-201ENST00000302787 NCR3O14931 201 aa15.96■□□□□ 0.14
LETM1-201ENST00000302787 MAP6D1Q9H9H5 199 aa15.95■□□□□ 0.14
LETM1-201ENST00000302787 TNFRSF13BO14836 293 aaPredicted RBP15.95■□□□□ 0.14
LETM1-201ENST00000302787 NFE4Q86UQ8 179 aa15.95■□□□□ 0.14
LETM1-201ENST00000302787 TMEM263Q8WUH6 116 aaKnown RBP15.95■□□□□ 0.14
LETM1-201ENST00000302787 CITED1Q99966 193 aa15.95■□□□□ 0.14
LETM1-201ENST00000302787 SPANXCQ9NY87 97 aa15.95■□□□□ 0.14
LETM1-201ENST00000302787 LECT2O14960 151 aa15.94■□□□□ 0.14
LETM1-201ENST00000302787 MIR7-3HGQ8N6C7 128 aa15.94■□□□□ 0.14
LETM1-201ENST00000302787 Q6ZUT4 128 aa15.94■□□□□ 0.14
LETM1-201ENST00000302787 H3BT86 120 aa15.94■□□□□ 0.14
LETM1-201ENST00000302787 FUSP35637 526 aaKnown RBP eCLIP15.94■□□□□ 0.14
LETM1-201ENST00000302787 CITED2Q99967 270 aaPredicted RBP15.94■□□□□ 0.14
LETM1-201ENST00000302787 NUP210LQ5VU65 1888 aa15.94■□□□□ 0.14
LETM1-201ENST00000302787 PCNX3Q9H6A9 2034 aa15.93■□□□□ 0.14
LETM1-201ENST00000302787 NDUFA1O15239 70 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 P0DMU3 169 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 FAM231AP0DMU4 169 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 FAM231CP0DMU5 169 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 RBM3P98179 157 aaKnown RBP15.92■□□□□ 0.14
LETM1-201ENST00000302787 PTH2Q96A98 100 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 PLCE1Q9P212 2302 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 FAM236AA0A1B0GUQ0 79 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 FAM236BA0A1B0GV22 79 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 CXCL5P42830 114 aa15.92■□□□□ 0.14
LETM1-201ENST00000302787 DEFB135Q30KP9 77 aa15.91■□□□□ 0.14
LETM1-201ENST00000302787 IGF1P05019 195 aa15.91■□□□□ 0.14
LETM1-201ENST00000302787 TRBV10-1A0A0K0K1A3 114 aa15.91■□□□□ 0.14
LETM1-201ENST00000302787 DEFB4AO15263 64 aa15.91■□□□□ 0.14
LETM1-201ENST00000302787 C20orf173Q96LM9 149 aa15.91■□□□□ 0.14
LETM1-201ENST00000302787 ODF3Q96PU9 254 aa15.91■□□□□ 0.14
LETM1-201ENST00000302787 LY6LH3BQJ8 138 aa15.9■□□□□ 0.14
LETM1-201ENST00000302787 FSTL3O95633 263 aa15.9■□□□□ 0.14
LETM1-201ENST00000302787 MIAQ16674 131 aa15.9■□□□□ 0.14
LETM1-201ENST00000302787 FAM208BQ5VWN6 2430 aa15.9■□□□□ 0.14
LETM1-201ENST00000302787 CRIP1P50238 77 aa15.9■□□□□ 0.14
LETM1-201ENST00000302787 NEXN-AS1Q8NBZ9 246 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 TP73-AS1Q9UF72 201 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 ATOX1O00244 68 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 TCL1BO95988 128 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 A0A1B0GX51 115 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 SPAG11BQ08648 103 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 CCL18P55774 89 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 TNRC6BQ9UPQ9 1833 aaKnown RBP15.89■□□□□ 0.13
LETM1-201ENST00000302787 MED12LQ86YW9 2145 aa15.89■□□□□ 0.13
LETM1-201ENST00000302787 A0A0J9YXY3 114 aa15.88■□□□□ 0.13
LETM1-201ENST00000302787 IGHV4-28A0A0C4DH34 117 aa15.88■□□□□ 0.13
LETM1-201ENST00000302787 JMJD7-PLA2G4BH0Y9G9 81 aa15.88■□□□□ 0.13
LETM1-201ENST00000302787 H3BQ85 93 aa15.88■□□□□ 0.13
LETM1-201ENST00000302787 C19orf84I3L1E1 186 aa15.88■□□□□ 0.13
LETM1-201ENST00000302787 TIRAPP58753 221 aa15.88■□□□□ 0.13
LETM1-201ENST00000302787 ZFAND3Q9H8U3 227 aa15.87■□□□□ 0.13
LETM1-201ENST00000302787 SMAD5-AS1Q9Y6J3 95 aa15.87■□□□□ 0.13
LETM1-201ENST00000302787 EBI3Q14213 229 aa15.87■□□□□ 0.13
LETM1-201ENST00000302787 CLPSL1A2RUU4 121 aa15.86■□□□□ 0.13
LETM1-201ENST00000302787 NACAE9PAV3 2078 aa15.86■□□□□ 0.13
LETM1-201ENST00000302787 DNAJC9-AS1A6NH13 148 aa15.86■□□□□ 0.13
LETM1-201ENST00000302787 K7EQG2 157 aa15.86■□□□□ 0.13
LETM1-201ENST00000302787 KLK12Q9UKR0 248 aa15.86■□□□□ 0.13
LETM1-201ENST00000302787 NDUFS5O43920 106 aa15.85■□□□□ 0.13
LETM1-201ENST00000302787 TMEM258P61165 79 aa15.85■□□□□ 0.13
LETM1-201ENST00000302787 PRO0255Q9UI72 69 aa15.85■□□□□ 0.13
LETM1-201ENST00000302787 U3KQK5 164 aa15.84■□□□□ 0.13
LETM1-201ENST00000302787 PSMB8P28062 276 aa15.84■□□□□ 0.13
LETM1-201ENST00000302787 F8W735 103 aaPredicted RBP15.84■□□□□ 0.13
LETM1-201ENST00000302787 Q6ZTI0 123 aa15.84■□□□□ 0.13
LETM1-201ENST00000302787 TTC28Q96AY4 2481 aa15.84■□□□□ 0.13
LETM1-201ENST00000302787 MUC6Q6W4X9 2439 aa15.84■□□□□ 0.13
LETM1-201ENST00000302787 ANKHD1Q8IWZ3 2542 aaKnown RBP15.83■□□□□ 0.12
LETM1-201ENST00000302787 MUC22E2RYF6 1773 aaPredicted RBP15.83■□□□□ 0.12
LETM1-201ENST00000302787 NREPQ16612 68 aa15.83■□□□□ 0.12
LETM1-201ENST00000302787 RNF185Q96GF1 192 aa15.83■□□□□ 0.12
LETM1-201ENST00000302787 PKIGQ9Y2B9 76 aa15.83■□□□□ 0.12
LETM1-201ENST00000302787 IGLV2-11P01706 119 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms