RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
PGAP3-201ENST00000300658 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
PGAP3-201ENST00000300658 LGALS9O00182 355 aa12.32□□□□□ -0.44
PGAP3-201ENST00000300658 ASIPP42127 132 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 TRBV20-1A0A075B6N2 111 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 RRN3P1Q2M238 152 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 C14orf178Q8N769 122 aaPredicted RBP12.31□□□□□ -0.44
PGAP3-201ENST00000300658 TRAV12-2A0A075B6T6 113 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 LEPP41159 167 aa12.31□□□□□ -0.44
PGAP3-201ENST00000300658 A0A0J9YX75 114 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 PLA2G2AP14555 144 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 MAPKAPK5-AS1Q8N8E1 139 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 CARD19Q96LW7 228 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 HHLA3Q9XRX5 114 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 UNC79Q9P2D8 2635 aa12.3□□□□□ -0.44
PGAP3-201ENST00000300658 TEX29Q8N6K0 151 aa12.29□□□□□ -0.44
PGAP3-201ENST00000300658 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
PGAP3-201ENST00000300658 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 Q8N8P6 123 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
PGAP3-201ENST00000300658 WNK1Q9H4A3 2382 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 KRTAP1-1Q07627 177 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 Q6ZSV7 163 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 TMEM158Q8WZ71 300 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 JPT2Q9H910 190 aa12.28□□□□□ -0.44
PGAP3-201ENST00000300658 SNRPD3P62318 126 aaKnown RBP12.27□□□□□ -0.44
PGAP3-201ENST00000300658 RASL10AQ92737 203 aa12.27□□□□□ -0.44
PGAP3-201ENST00000300658 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.44
PGAP3-201ENST00000300658 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
PGAP3-201ENST00000300658 KHDC1LQ5JSQ8 128 aa12.26□□□□□ -0.45
PGAP3-201ENST00000300658 ZC2HC1BQ5TFG8 222 aa12.26□□□□□ -0.45
PGAP3-201ENST00000300658 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
PGAP3-201ENST00000300658 HIST1H4GQ99525 98 aa12.26□□□□□ -0.45
PGAP3-201ENST00000300658 DNAJC9-AS1A6NH13 148 aa12.25□□□□□ -0.45
PGAP3-201ENST00000300658 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
PGAP3-201ENST00000300658 CD7P09564 240 aa12.25□□□□□ -0.45
PGAP3-201ENST00000300658 LINC00315P59091 139 aa12.25□□□□□ -0.45
PGAP3-201ENST00000300658 MORN3Q6PF18 240 aaPredicted RBP12.25□□□□□ -0.45
PGAP3-201ENST00000300658 DLX4Q92988 240 aaPredicted RBP12.25□□□□□ -0.45
PGAP3-201ENST00000300658 CSDC2Q9Y534 153 aaKnown RBP12.25□□□□□ -0.45
PGAP3-201ENST00000300658 FASNP49327 2511 aaKnown RBP12.25□□□□□ -0.45
PGAP3-201ENST00000300658 A0A087WX48 190 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 J3QKU1 62 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 GAGE7O76087 117 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 GAGE12FP0CL80 117 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 GAGE12GP0CL81 117 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 GAGE12IP0CL82 117 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 PSMB2P49721 201 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 GAGE4Q13068 117 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 C11orf44Q8N8P7 122 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 DPH3P1Q9H4G8 78 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 MDFICQ9P1T7 246 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 KIF25-AS1Q9Y6Z4 181 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 LINC01619G3V211 115 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 PRSS1P07477 247 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 NXPH4O95158 308 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 MGPP08493 103 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 ZFP2Q6ZN57 461 aa12.24□□□□□ -0.45
PGAP3-201ENST00000300658 KNCNA6PVL3 124 aa12.23□□□□□ -0.45
PGAP3-201ENST00000300658 C4orf3Q8WVX3 66 aa12.23□□□□□ -0.45
PGAP3-201ENST00000300658 IGKCP01834 107 aa12.23□□□□□ -0.45
PGAP3-201ENST00000300658 KLHL30-AS1Q8NEE0 82 aa12.23□□□□□ -0.45
PGAP3-201ENST00000300658 ODF3Q96PU9 254 aa12.23□□□□□ -0.45
PGAP3-201ENST00000300658 TMEM160Q9NX00 188 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 GCN1Q92616 2671 aaKnown RBP12.22□□□□□ -0.45
PGAP3-201ENST00000300658 LOC107984156A0A0G2JMH3 177 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 NDUFV3P56181 108 aaKnown RBP12.22□□□□□ -0.45
PGAP3-201ENST00000300658 LAGE3Q14657 143 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 ARL17AQ8IVW1 177 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 Q8N1Y9 231 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 TMEM86BQ8N661 226 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 FOXC2Q99958 501 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 CITED2Q99967 270 aaPredicted RBP12.22□□□□□ -0.45
PGAP3-201ENST00000300658 SMIM2Q9BVW6 85 aa12.22□□□□□ -0.45
PGAP3-201ENST00000300658 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
PGAP3-201ENST00000300658 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
PGAP3-201ENST00000300658 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.45
PGAP3-201ENST00000300658 DEFB131AP59861 70 aa12.21□□□□□ -0.45
PGAP3-201ENST00000300658 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.45
PGAP3-201ENST00000300658 PPDPFLQ8WWR9 84 aa12.21□□□□□ -0.45
PGAP3-201ENST00000300658 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.45
PGAP3-201ENST00000300658 A0A087WWL8 130 aa12.21□□□□□ -0.46
PGAP3-201ENST00000300658 SUMO2P61956 95 aaKnown RBP12.21□□□□□ -0.46
PGAP3-201ENST00000300658 C3orf56Q8N813 242 aa12.21□□□□□ -0.46
PGAP3-201ENST00000300658 ZMAT4Q9H898 229 aa12.21□□□□□ -0.46
PGAP3-201ENST00000300658 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
PGAP3-201ENST00000300658 PRM2P04554 102 aa12.2□□□□□ -0.46
PGAP3-201ENST00000300658 POM121L12Q8N7R1 296 aa12.19□□□□□ -0.46
PGAP3-201ENST00000300658 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
PGAP3-201ENST00000300658 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
PGAP3-201ENST00000300658 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms