RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 HIVEP3Q5T1R4 2406 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 MYO9AB2RTY4 2548 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 ELANEP08246 267 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 FOXC1Q12948 553 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 EBI3Q14213 229 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 TMEM95Q3KNT9 176 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 TRIAP1O43715 76 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
TRUB1-201ENST00000298746 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 DAND5Q8N907 189 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 NCOR2Q9Y618 2525 aa8.56□□□□□ -1.04
TRUB1-201ENST00000298746 CEMP1Q6PRD7 247 aaPredicted RBP8.55□□□□□ -1.04
TRUB1-201ENST00000298746 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
TRUB1-201ENST00000298746 MDFICQ9P1T7 246 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 TMEM263Q8WUH6 116 aaKnown RBP8.55□□□□□ -1.04
TRUB1-201ENST00000298746 MOB4Q9Y3A3 225 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 RELNP78509 3460 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 KNCNA6PVL3 124 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 BPESC1Q9GZL8 116 aa8.55□□□□□ -1.04
TRUB1-201ENST00000298746 TRBV7-9A0A0J9YWB2 115 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 A0A0J9YXY3 114 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 FAM223BA6NKX1 122 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 NDUFA4O00483 81 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
TRUB1-201ENST00000298746 Q6ZSV7 163 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 FAM223AQ8IWN6 122 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 ITLN2Q8WWU7 325 aaPredicted RBP8.54□□□□□ -1.04
TRUB1-201ENST00000298746 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 USP9YO00507 2555 aaPredicted RBP8.54□□□□□ -1.04
TRUB1-201ENST00000298746 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 ICOSQ9Y6W8 199 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 A8MZ25 164 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 C5orf56Q8N8D9 126 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 TNFRSF18Q9Y5U5 241 aa8.54□□□□□ -1.04
TRUB1-201ENST00000298746 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 SIRPDQ9H106 197 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 PTPN13Q12923 2485 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 I3L3M4 83 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 CITED1Q99966 193 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 DAZ1Q9NQZ3 744 aaKnown RBP8.53□□□□□ -1.04
TRUB1-201ENST00000298746 U3KQE9 123 aa8.53□□□□□ -1.04
TRUB1-201ENST00000298746 IGHV4OR15-8A0A075B7B6 117 aa8.52□□□□□ -1.04
TRUB1-201ENST00000298746 A0A087WW49 117 aa8.52□□□□□ -1.04
TRUB1-201ENST00000298746 MED14OSP0DP75 135 aa8.52□□□□□ -1.04
TRUB1-201ENST00000298746 NHLRC4P0CG21 123 aaPredicted RBP8.52□□□□□ -1.05
TRUB1-201ENST00000298746 SBSPONQ8IVN8 264 aa8.52□□□□□ -1.05
TRUB1-201ENST00000298746 SNRPD3P62318 126 aaKnown RBP8.52□□□□□ -1.05
TRUB1-201ENST00000298746 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
TRUB1-201ENST00000298746 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 P0DMU3 169 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 FAM231AP0DMU4 169 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 FAM231CP0DMU5 169 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
TRUB1-201ENST00000298746 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 CDSNQ15517 529 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 SETD2Q9BYW2 2564 aaPredicted RBP8.51□□□□□ -1.05
TRUB1-201ENST00000298746 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 H3BUX3 64 aa8.51□□□□□ -1.05
TRUB1-201ENST00000298746 EDN2P20800 178 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 LINC00315P59091 139 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 RHOHQ15669 191 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 ZNF292O60281 2723 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 LGALS9O00182 355 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 BLCAPP62952 87 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 CIRBPQ14011 172 aaKnown RBP8.5□□□□□ -1.05
TRUB1-201ENST00000298746 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 IGHV3-38A0A0C4DH36 116 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 M0QY20 66 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 SHISA2Q6UWI4 295 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
TRUB1-201ENST00000298746 H7C423 109 aa8.49□□□□□ -1.05
TRUB1-201ENST00000298746 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
TRUB1-201ENST00000298746 IGHV1OR15-1A0A075B7D0 117 aa8.49□□□□□ -1.05
TRUB1-201ENST00000298746 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
TRUB1-201ENST00000298746 FAM236AA0A1B0GUQ0 79 aa8.49□□□□□ -1.05
TRUB1-201ENST00000298746 FAM236BA0A1B0GV22 79 aa8.49□□□□□ -1.05
TRUB1-201ENST00000298746 IGHV1-69P01742 117 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 AMELXQ99217 191 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
TRUB1-201ENST00000298746 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
TRUB1-201ENST00000298746 IGF2-ASQ6U949 168 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 USMG5Q96IX5 58 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 USP9XQ93008 2570 aaPredicted RBP8.48□□□□□ -1.05
TRUB1-201ENST00000298746 CHD8Q9HCK8 2581 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
TRUB1-201ENST00000298746 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 YAE1D1Q9NRH1 226 aa8.48□□□□□ -1.05
TRUB1-201ENST00000298746 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
TRUB1-201ENST00000298746 COL12A1Q99715 3063 aa8.47□□□□□ -1.05
TRUB1-201ENST00000298746 PROK1P58294 105 aa8.47□□□□□ -1.05
TRUB1-201ENST00000298746 IGHV3-16A0A0C4DH30 117 aa8.47□□□□□ -1.05
TRUB1-201ENST00000298746 H3BT86 120 aa8.47□□□□□ -1.05
TRUB1-201ENST00000298746 KLRB1Q12918 225 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 314.9 ms