RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 C6orf223Q8N319 242 aa11.35□□□□□ -0.59
NPM1-201ENST00000296930 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
NPM1-201ENST00000296930 KIAA1644Q3SXP7 199 aa11.34□□□□□ -0.59
NPM1-201ENST00000296930 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
NPM1-201ENST00000296930 RNF185Q96GF1 192 aa11.34□□□□□ -0.59
NPM1-201ENST00000296930 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
NPM1-201ENST00000296930 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.59
NPM1-201ENST00000296930 C1orf196B1AJZ1 125 aa11.33□□□□□ -0.59
NPM1-201ENST00000296930 C14orf178Q8N769 122 aaPredicted RBP11.33□□□□□ -0.59
NPM1-201ENST00000296930 RASL10AQ92737 203 aa11.33□□□□□ -0.59
NPM1-201ENST00000296930 Q9H8V8 135 aa11.33□□□□□ -0.59
NPM1-201ENST00000296930 KIF25-AS1Q9Y6Z4 181 aa11.33□□□□□ -0.59
NPM1-201ENST00000296930 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
NPM1-201ENST00000296930 SMIM15Q7Z3B0 74 aa11.33□□□□□ -0.6
NPM1-201ENST00000296930 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
NPM1-201ENST00000296930 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
NPM1-201ENST00000296930 RAB4AP20338 218 aa11.32□□□□□ -0.6
NPM1-201ENST00000296930 LINC00315P59091 139 aa11.32□□□□□ -0.6
NPM1-201ENST00000296930 SAMD10Q9BYL1 202 aa11.32□□□□□ -0.6
NPM1-201ENST00000296930 TMA7Q9Y2S6 64 aaKnown RBP11.32□□□□□ -0.6
NPM1-201ENST00000296930 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
NPM1-201ENST00000296930 CRYGDP07320 174 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 TNP2Q05952 138 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
NPM1-201ENST00000296930 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 UPK3BQ9BT76 320 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 A0A087WWL8 130 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 ESRGQ1W209 222 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
NPM1-201ENST00000296930 A8MWV9 139 aa11.3□□□□□ -0.6
NPM1-201ENST00000296930 RAB5BP61020 215 aa11.3□□□□□ -0.6
NPM1-201ENST00000296930 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
NPM1-201ENST00000296930 MRPS16Q9Y3D3 137 aaKnown RBP11.3□□□□□ -0.6
NPM1-201ENST00000296930 PCLOQ9Y6V0 5065 aa11.29□□□□□ -0.6
NPM1-201ENST00000296930 SMIM17P0DL12 118 aa11.29□□□□□ -0.6
NPM1-201ENST00000296930 SRIP30626 198 aa11.29□□□□□ -0.6
NPM1-201ENST00000296930 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
NPM1-201ENST00000296930 CFAP126Q5VTH2 177 aa11.29□□□□□ -0.6
NPM1-201ENST00000296930 A0A096LPF7 62 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 D6R8Y8 96 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 MGPP08493 103 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 ALKBH7Q9BT30 221 aaPredicted RBP11.28□□□□□ -0.6
NPM1-201ENST00000296930 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 RS1O15537 224 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 NCR2O95944 276 aa11.28□□□□□ -0.6
NPM1-201ENST00000296930 TRAV26-2A0A0B4J265 109 aa11.27□□□□□ -0.61
NPM1-201ENST00000296930 CKS2P33552 79 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 C16orf90A8MZG2 172 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 PAX4O43316 350 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 PPBPP02775 128 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 GATA1P15976 413 aaPredicted RBP11.26□□□□□ -0.61
NPM1-201ENST00000296930 MRAP2Q96G30 205 aa11.26□□□□□ -0.61
NPM1-201ENST00000296930 IGHV3-73A0A0B4J1V6 119 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 TRAV4A0A0B4J268 109 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 RHODO00212 210 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 BTF3P20290 206 aaKnown RBP11.25□□□□□ -0.61
NPM1-201ENST00000296930 ZNF56Q15929 161 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 SUMO4Q6EEV6 95 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 C18orf32Q8TCD1 76 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
NPM1-201ENST00000296930 NPYP01303 97 aa11.24□□□□□ -0.61
NPM1-201ENST00000296930 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
NPM1-201ENST00000296930 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
NPM1-201ENST00000296930 F5H697 171 aa11.23□□□□□ -0.61
NPM1-201ENST00000296930 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
NPM1-201ENST00000296930 NRACQ8N912 160 aa11.23□□□□□ -0.61
NPM1-201ENST00000296930 IQCJQ1A5X6 159 aa11.23□□□□□ -0.61
NPM1-201ENST00000296930 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
NPM1-201ENST00000296930 M0QY20 66 aa11.22□□□□□ -0.61
NPM1-201ENST00000296930 CRYBA4P53673 196 aa11.22□□□□□ -0.61
NPM1-201ENST00000296930 Q0VG73 95 aa11.22□□□□□ -0.61
NPM1-201ENST00000296930 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
NPM1-201ENST00000296930 Q6ZSN1 163 aa11.22□□□□□ -0.61
NPM1-201ENST00000296930 SIVA1O15304 175 aa11.21□□□□□ -0.61
NPM1-201ENST00000296930 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
NPM1-201ENST00000296930 FHL2Q14192 279 aa11.21□□□□□ -0.61
NPM1-201ENST00000296930 RPL39LQ96EH5 51 aaKnown RBP11.21□□□□□ -0.61
NPM1-201ENST00000296930 LAMTOR2Q9Y2Q5 125 aa11.21□□□□□ -0.61
NPM1-201ENST00000296930 RYR1P21817 5038 aa11.21□□□□□ -0.61
NPM1-201ENST00000296930 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.62
NPM1-201ENST00000296930 NDUFA6P56556 154 aa11.21□□□□□ -0.62
NPM1-201ENST00000296930 MRPL23Q16540 153 aaKnown RBP11.21□□□□□ -0.62
NPM1-201ENST00000296930 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms