RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
SNIP1-201ENST00000296215 IGHV1-69P01742 117 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 RFPL3SP0C7P2 107 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 COX6B1P14854 86 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 KRTAP27-1Q3LI81 207 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 CREBBPQ92793 2442 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 THADAQ6YHU6 1953 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 IGKV1D-17A0A075B6S4 117 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 SLPIP03973 132 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.9□□□□□ -0.98
SNIP1-201ENST00000296215 ARHGAP32A7KAX9 2087 aa8.9□□□□□ -0.98
SNIP1-201ENST00000296215 ZSWIM8A7E2V4 1837 aa8.9□□□□□ -0.99
SNIP1-201ENST00000296215 PIEZO1Q92508 2521 aa8.89□□□□□ -0.99
SNIP1-201ENST00000296215 Q8N6K4 173 aa8.89□□□□□ -0.99
SNIP1-201ENST00000296215 TNRC6BQ9UPQ9 1833 aaKnown RBP8.89□□□□□ -0.99
SNIP1-201ENST00000296215 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
SNIP1-201ENST00000296215 FGF23Q9GZV9 251 aaPredicted RBP8.89□□□□□ -0.99
SNIP1-201ENST00000296215 PDE6GP18545 87 aa8.89□□□□□ -0.99
SNIP1-201ENST00000296215 PIP4P2Q8N4L2 257 aa8.89□□□□□ -0.99
SNIP1-201ENST00000296215 PRYO14603 147 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 LINC01565O15544 149 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 ZNF80P51504 273 aaPredicted RBP8.88□□□□□ -0.99
SNIP1-201ENST00000296215 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 HELZP42694 1942 aaKnown RBP8.88□□□□□ -0.99
SNIP1-201ENST00000296215 ROS1P08922 2347 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 DKK1O94907 266 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 DEFB109BQ30KR1 87 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 C15orf32Q32M92 178 aa8.88□□□□□ -0.99
SNIP1-201ENST00000296215 PRR15LQ9BU68 103 aa8.87□□□□□ -0.99
SNIP1-201ENST00000296215 GOLGB1Q14789 3259 aaKnown RBP8.87□□□□□ -0.99
SNIP1-201ENST00000296215 PCOLCEQ15113 449 aa8.87□□□□□ -0.99
SNIP1-201ENST00000296215 NKAPP1Q8N9T2 125 aa8.87□□□□□ -0.99
SNIP1-201ENST00000296215 Q6ZSV7 163 aa8.87□□□□□ -0.99
SNIP1-201ENST00000296215 TMEM254Q8TBM7 123 aa8.87□□□□□ -0.99
SNIP1-201ENST00000296215 TNCP24821 2201 aa8.87□□□□□ -0.99
SNIP1-201ENST00000296215 TTTY12Q9BZ98 90 aa8.86□□□□□ -0.99
SNIP1-201ENST00000296215 GNRH2O43555 120 aa8.86□□□□□ -0.99
SNIP1-201ENST00000296215 DPM3Q9P2X0 92 aa8.86□□□□□ -0.99
SNIP1-201ENST00000296215 NOTCH3Q9UM47 2321 aa8.86□□□□□ -0.99
SNIP1-201ENST00000296215 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
SNIP1-201ENST00000296215 CFHR3Q02985 330 aa8.85□□□□□ -0.99
SNIP1-201ENST00000296215 MUC6Q6W4X9 2439 aa8.85□□□□□ -0.99
SNIP1-201ENST00000296215 IGLV2-11P01706 119 aa8.85□□□□□ -0.99
SNIP1-201ENST00000296215 NRACQ8N912 160 aa8.85□□□□□ -0.99
SNIP1-201ENST00000296215 IGLV3-19P01714 112 aa8.85□□□□□ -0.99
SNIP1-201ENST00000296215 IGKV1-17P01599 117 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 NANOS2P60321 138 aaKnown RBP8.84□□□□□ -0.99
SNIP1-201ENST00000296215 BEAN1Q3B7T3 259 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 UBE2E2Q96LR5 201 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 MDFIQ99750 246 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 SPRR3Q9UBC9 169 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 NLRC5Q86WI3 1866 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
SNIP1-201ENST00000296215 BPY2O14599 106 aa8.84□□□□□ -1
SNIP1-201ENST00000296215 C20orf203Q8NBC4 194 aa8.84□□□□□ -1
SNIP1-201ENST00000296215 C17orf58Q2M2W7 97 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 TTC28Q96AY4 2481 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 A0A0J9YX75 114 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 KTN1-AS1Q86SY8 53 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 SMCR5Q8TEV8 140 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.83□□□□□ -1
SNIP1-201ENST00000296215 IGKV2-29A2NJV5 120 aaPredicted RBP8.83□□□□□ -1
SNIP1-201ENST00000296215 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 PCNX2A6NKB5 2137 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 EP400Q96L91 3159 aa8.83□□□□□ -1
SNIP1-201ENST00000296215 IGHV3-38A0A0C4DH36 116 aa8.82□□□□□ -1
SNIP1-201ENST00000296215 ZNF833PQ6ZTB9 187 aa8.82□□□□□ -1
SNIP1-201ENST00000296215 Q8N3U1 123 aa8.82□□□□□ -1
SNIP1-201ENST00000296215 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
SNIP1-201ENST00000296215 IGHV1-3A0A0C4DH29 117 aa8.82□□□□□ -1
SNIP1-201ENST00000296215 C17orf82Q86X59 251 aaPredicted RBP8.82□□□□□ -1
SNIP1-201ENST00000296215 ADAMTSL1Q8N6G6 1762 aa8.82□□□□□ -1
SNIP1-201ENST00000296215 J3QKU1 62 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 DEFB121Q5J5C9 76 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 RUSC1-AS1Q66K80 236 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 GGNQ86UU5 652 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 ACACAQ13085 2346 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 CLPSL1A2RUU4 121 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 DCANP1Q8TF63 244 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 RPL28P46779 137 aaKnown RBP8.81□□□□□ -1
SNIP1-201ENST00000296215 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
SNIP1-201ENST00000296215 VWA8A3KMH1 1905 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 PRAC2D3DTV9 90 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 PLXNA1Q9UIW2 1896 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 RNF5Q99942 180 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 CUL9Q8IWT3 2517 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 SIP14410 1827 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 RITA1Q96K30 269 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 Q9UF83 564 aa8.8□□□□□ -1
SNIP1-201ENST00000296215 IGHV1-2P23083 117 aa8.79□□□□□ -1
SNIP1-201ENST00000296215 IGHV4-28A0A0C4DH34 117 aa8.79□□□□□ -1
SNIP1-201ENST00000296215 BCE1O60756 84 aa8.79□□□□□ -1
SNIP1-201ENST00000296215 NDUFB1O75438 58 aa8.79□□□□□ -1
SNIP1-201ENST00000296215 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
SNIP1-201ENST00000296215 FNDC1Q4ZHG4 1894 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms