RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 LEPROTO15243 131 aa7.68□□□□□ -1.18
CLDN1-201ENST00000295522 IGIPA6NJ69 53 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 CD28P10747 220 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 NSUN5P1Q3KNT7 163 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 ASH1LQ9NR48 2969 aaKnown RBP7.67□□□□□ -1.18
CLDN1-201ENST00000295522 RELNP78509 3460 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 RHOHQ15669 191 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 OR13C6PQ8NH95 151 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 PSMG3-AS1Q96PY0 264 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
CLDN1-201ENST00000295522 I3L3M4 83 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 H3BT86 120 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 ZNF672Q499Z4 452 aaPredicted RBP7.66□□□□□ -1.18
CLDN1-201ENST00000295522 ZNF876PQ49A33 203 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 MAP1AP78559 2803 aaPredicted RBP7.66□□□□□ -1.18
CLDN1-201ENST00000295522 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 IGHV3-11P01762 117 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 IGHV3-30-3P0DP02 117 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 C20orf173Q96LM9 149 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 RNF5Q99942 180 aa7.66□□□□□ -1.18
CLDN1-201ENST00000295522 IGHV1-69DA0A0B4J2H0 117 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 CLPSL1A2RUU4 121 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 M0R1W7 72 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 UQCRQO14949 82 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 NUP37Q8NFH4 326 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 ATP6V0E1O15342 81 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 ADAMTSL4-AS1Q5T5F5 129 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 GPHB5Q86YW7 130 aa7.65□□□□□ -1.18
CLDN1-201ENST00000295522 TMEM223A0PJW6 202 aa7.65□□□□□ -1.19
CLDN1-201ENST00000295522 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 C9orf47Q6ZRZ4 202 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 AMELXQ99217 191 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 AKAP13Q12802 2813 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 E7EQL1 145 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 HOXD3P31249 432 aaPredicted RBP7.64□□□□□ -1.19
CLDN1-201ENST00000295522 VMO1Q7Z5L0 202 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 KAAG1Q9UBP8 84 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 IGHV4-4A0A075B6R2 117 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 TIMM17AQ99595 171 aa7.64□□□□□ -1.19
CLDN1-201ENST00000295522 IGHV7-81A0A0B4J1V7 117 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 RNF223E7ERA6 249 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 SDIM1Q6ZPB5 146 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 ZFAND3Q9H8U3 227 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 IGF2RP11717 2491 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 TRAV12-2A0A075B6T6 113 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 ZFAND2AQ8N6M9 145 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 LINC01560Q8TB33 94 aa7.63□□□□□ -1.19
CLDN1-201ENST00000295522 NXPH4O95158 308 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 TRACP01848 142 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 RNASE3P12724 160 aaKnown RBP7.62□□□□□ -1.19
CLDN1-201ENST00000295522 LST1O00453 97 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 TMEM219Q86XT9 240 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 KIR2DL5BQ8NHK3 375 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 IGHV3OR16-10A0A075B7F0 116 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 A0A0G2JNJ9 132 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 DAZ2Q13117 558 aaKnown RBP7.62□□□□□ -1.19
CLDN1-201ENST00000295522 C9orf139Q6ZV77 190 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 DAZ4Q86SG3 579 aaKnown RBP7.62□□□□□ -1.19
CLDN1-201ENST00000295522 DAZ1Q9NQZ3 744 aaKnown RBP7.62□□□□□ -1.19
CLDN1-201ENST00000295522 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
CLDN1-201ENST00000295522 Q9UFV3 132 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 MUC4Q99102 2169 aa7.62□□□□□ -1.19
CLDN1-201ENST00000295522 A0A1B0GX51 115 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 PLA2G2CQ5R387 149 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 CCDC140Q96MF4 163 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 RNF152Q8N8N0 203 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 Q9HAA7 133 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 KLK9Q9UKQ9 250 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 BAALC-AS2P0C853 105 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 POLR2KP53803 58 aaKnown RBP7.61□□□□□ -1.19
CLDN1-201ENST00000295522 LINC00643Q86TS7 51 aa7.61□□□□□ -1.19
CLDN1-201ENST00000295522 NPBQ8NG41 125 aa7.6□□□□□ -1.19
CLDN1-201ENST00000295522 CHD8Q9HCK8 2581 aa7.6□□□□□ -1.19
CLDN1-201ENST00000295522 LY6LH3BQJ8 138 aa7.6□□□□□ -1.19
CLDN1-201ENST00000295522 DNAL4O96015 105 aa7.6□□□□□ -1.19
CLDN1-201ENST00000295522 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
CLDN1-201ENST00000295522 UNQ9165/PRO28630Q6UXU0 137 aa7.6□□□□□ -1.19
CLDN1-201ENST00000295522 LINC00526Q96FQ7 95 aa7.6□□□□□ -1.19
CLDN1-201ENST00000295522 KNCNA6PVL3 124 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 PEMTQ9UBM1 199 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.59□□□□□ -1.19
CLDN1-201ENST00000295522 COX7CP15954 63 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 PIEZO1Q92508 2521 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 A0A087WVE0 104 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 OVOL1O14753 267 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 EBI3Q14213 229 aa7.59□□□□□ -1.19
CLDN1-201ENST00000295522 IGLV4-3A0A075B6K6 122 aa7.58□□□□□ -1.2
CLDN1-201ENST00000295522 TRBV12-3P01733 135 aa7.58□□□□□ -1.2
CLDN1-201ENST00000295522 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
CLDN1-201ENST00000295522 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
CLDN1-201ENST00000295522 POM121L12Q8N7R1 296 aa7.58□□□□□ -1.2
CLDN1-201ENST00000295522 IGHV3-38A0A0C4DH36 116 aa7.58□□□□□ -1.2
CLDN1-201ENST00000295522 MIAQ16674 131 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms