RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 MANBALQ9NQG1 85 aa11.38□□□□□ -0.59
TFF3-201ENST00000291525 HERC1Q15751 4861 aa11.37□□□□□ -0.59
TFF3-201ENST00000291525 ANGP03950 147 aaKnown RBP11.37□□□□□ -0.59
TFF3-201ENST00000291525 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
TFF3-201ENST00000291525 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
TFF3-201ENST00000291525 MPV17L2Q567V2 206 aa11.36□□□□□ -0.59
TFF3-201ENST00000291525 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
TFF3-201ENST00000291525 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
TFF3-201ENST00000291525 MUC21A0A0G2JKD1 596 aa11.35□□□□□ -0.59
TFF3-201ENST00000291525 MUC21A0A140T8X8 626 aa11.35□□□□□ -0.59
TFF3-201ENST00000291525 TEX46H3BTG2 121 aa11.35□□□□□ -0.59
TFF3-201ENST00000291525 MIAQ16674 131 aa11.35□□□□□ -0.59
TFF3-201ENST00000291525 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
TFF3-201ENST00000291525 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
TFF3-201ENST00000291525 MYCBP2O75592 4640 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 TRBV25-1A0A075B6N4 114 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 H7C1H1 209 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
TFF3-201ENST00000291525 SSTP61278 116 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 C11orf52Q96A22 123 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 GNG13Q9P2W3 67 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
TFF3-201ENST00000291525 HLA-DQA1P01909 254 aa11.33□□□□□ -0.6
TFF3-201ENST00000291525 RAB5CP51148 216 aa11.33□□□□□ -0.6
TFF3-201ENST00000291525 EIF5AL1Q6IS14 154 aaKnown RBP11.33□□□□□ -0.6
TFF3-201ENST00000291525 DERL1Q9BUN8 251 aa11.33□□□□□ -0.6
TFF3-201ENST00000291525 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
TFF3-201ENST00000291525 CENPWQ5EE01 88 aa11.32□□□□□ -0.6
TFF3-201ENST00000291525 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
TFF3-201ENST00000291525 SMIM12Q96EX1 92 aa11.32□□□□□ -0.6
TFF3-201ENST00000291525 TPPP3Q9BW30 176 aa11.32□□□□□ -0.6
TFF3-201ENST00000291525 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
TFF3-201ENST00000291525 TRAV1-1A0A0B4J248 108 aa11.31□□□□□ -0.6
TFF3-201ENST00000291525 MGPP08493 103 aa11.31□□□□□ -0.6
TFF3-201ENST00000291525 CACNG7P62955 275 aa11.31□□□□□ -0.6
TFF3-201ENST00000291525 OR2D3Q8NGH3 330 aa11.31□□□□□ -0.6
TFF3-201ENST00000291525 IGHV1-24A0A0C4DH33 117 aa11.3□□□□□ -0.6
TFF3-201ENST00000291525 KRTAP29-1A8MX34 341 aaPredicted RBP11.3□□□□□ -0.6
TFF3-201ENST00000291525 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
TFF3-201ENST00000291525 GNG4P50150 75 aa11.3□□□□□ -0.6
TFF3-201ENST00000291525 GAGE6Q13070 117 aa11.3□□□□□ -0.6
TFF3-201ENST00000291525 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
TFF3-201ENST00000291525 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
TFF3-201ENST00000291525 PDE6DO43924 150 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 IFNA1P01562 189 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 IGLV2-8P01709 118 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 RBX1P62877 108 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 CCL20P78556 96 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 PRR34Q9NV39 138 aa11.29□□□□□ -0.6
TFF3-201ENST00000291525 F2Z2F3 143 aa11.28□□□□□ -0.6
TFF3-201ENST00000291525 P01737 135 aa11.28□□□□□ -0.6
TFF3-201ENST00000291525 TRGC1P0CF51 173 aa11.28□□□□□ -0.6
TFF3-201ENST00000291525 GZMBP10144 247 aa11.28□□□□□ -0.6
TFF3-201ENST00000291525 DGAT2L7PQ6IED9 249 aa11.28□□□□□ -0.6
TFF3-201ENST00000291525 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
TFF3-201ENST00000291525 M0QY20 66 aa11.27□□□□□ -0.61
TFF3-201ENST00000291525 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
TFF3-201ENST00000291525 SUMO4Q6EEV6 95 aa11.27□□□□□ -0.61
TFF3-201ENST00000291525 CLPSL2Q6UWE3 100 aa11.27□□□□□ -0.61
TFF3-201ENST00000291525 LINC00269Q8N2A0 174 aa11.27□□□□□ -0.61
TFF3-201ENST00000291525 PRSS1P07477 247 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 SULT1A2P50226 295 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 REG3AQ06141 175 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 CLRN3Q8NCR9 226 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 TMEM243Q9BU79 118 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 DPH3P1Q9H4G8 78 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 MED9Q9NWA0 146 aa11.25□□□□□ -0.61
TFF3-201ENST00000291525 RAB19A4D1S5 217 aa11.24□□□□□ -0.61
TFF3-201ENST00000291525 NKX2-5P52952 324 aaPredicted RBP11.24□□□□□ -0.61
TFF3-201ENST00000291525 TRAV8-4A0A0B4J246 113 aa11.23□□□□□ -0.61
TFF3-201ENST00000291525 BCL2P10415 239 aa11.23□□□□□ -0.61
TFF3-201ENST00000291525 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
TFF3-201ENST00000291525 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
TFF3-201ENST00000291525 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
TFF3-201ENST00000291525 A0A1B0GUV1 79 aa11.22□□□□□ -0.61
TFF3-201ENST00000291525 UBE2L6O14933 153 aa11.22□□□□□ -0.61
TFF3-201ENST00000291525 WDR73Q6P4I2 378 aa11.22□□□□□ -0.61
TFF3-201ENST00000291525 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
TFF3-201ENST00000291525 NIT2Q9NQR4 276 aa11.22□□□□□ -0.61
TFF3-201ENST00000291525 OXTP01178 125 aa11.21□□□□□ -0.61
TFF3-201ENST00000291525 NTF3P20783 257 aa11.21□□□□□ -0.61
TFF3-201ENST00000291525 KRTAP10-4P60372 401 aaPredicted RBP11.21□□□□□ -0.61
TFF3-201ENST00000291525 RPL37AP61513 92 aaKnown RBP11.21□□□□□ -0.61
TFF3-201ENST00000291525 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.61
TFF3-201ENST00000291525 IGLV10-54A0A075B6I4 117 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 CTRLP40313 264 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 COTL1Q14019 142 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 C9orf62Q8N4C0 152 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
TFF3-201ENST00000291525 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
TFF3-201ENST00000291525 AMTP48728 403 aa11.19□□□□□ -0.62
TFF3-201ENST00000291525 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms