RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 KIF26BQ2KJY2 2108 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 DSPP15924 2871 aaKnown RBP6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 LOC101059948A0A1B0GTJ6 334 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 COL4A2P08572 1712 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 ENHOQ6UWT2 76 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 HS3ST6Q96QI5 342 aa6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 EP300Q09472 2414 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL-201ENST00000273179 ARHGAP21Q5T5U3 1957 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 PRB3Q04118 309 aaPredicted RBP6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 FOXL2NBQ6ZUU3 175 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 C16orf95Q9H693 158 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 NTN3O00634 580 aaPredicted RBP6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 LINC00588Q9Y4M8 146 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 IGKV1-5P01602 117 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 TMEM61Q8N0U2 210 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 DOCK10Q96BY6 2186 aa6.67□□□□□ -1.34
CTDSPL-201ENST00000273179 CADP27708 2225 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 RNASE6Q93091 150 aaKnown RBP6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 URB1-AS1Q96HZ7 61 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 FREM3P0C091 2139 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 PROP1O75360 226 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 IGHV1-8P0DP01 117 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 DEFB109BQ30KR1 87 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 FAM186AA6NE01 2351 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 C10orf142B7Z368 130 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 H7BZZ5 65 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 DSCAML1Q8TD84 2053 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 CRPP02741 224 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 IGKV1-16P04430 117 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 TMEM190Q8WZ59 177 aa6.66□□□□□ -1.34
CTDSPL-201ENST00000273179 TRBV30A0A0K0K1B3 111 aa6.65□□□□□ -1.34
CTDSPL-201ENST00000273179 DIRC1Q969H9 104 aa6.65□□□□□ -1.34
CTDSPL-201ENST00000273179 NBEAQ8NFP9 2946 aa6.65□□□□□ -1.34
CTDSPL-201ENST00000273179 IGKV1-9A0A0C4DH69 117 aa6.65□□□□□ -1.35
CTDSPL-201ENST00000273179 TMEM131Q92545 1883 aa6.65□□□□□ -1.35
CTDSPL-201ENST00000273179 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 WISP2O76076 250 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 SP5Q6BEB4 398 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 SPTBN2O15020 2390 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 CD28P10747 220 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 KLHL30-AS1Q8NEE0 82 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 ZNF318Q5VUA4 2279 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 ADAMTS9Q9P2N4 1935 aa6.64□□□□□ -1.35
CTDSPL-201ENST00000273179 IGKV3D-15A0A087WSY6 115 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 PTPRZ1P23471 2315 aaPredicted RBP6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 EML5Q05BV3 1969 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 MAP6D1Q9H9H5 199 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 NCOA6Q14686 2063 aaPredicted RBP6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 CEP192Q8TEP8 1941 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 IGHV3-64DA0A0J9YX35 117 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 DEFB124Q8NES8 71 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 MGAQ8IWI9 3026 aa6.63□□□□□ -1.35
CTDSPL-201ENST00000273179 ZNF497Q6ZNH5 498 aa6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 C14orf132Q9NPU4 83 aa6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 IGFL3Q6UXB1 125 aa6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 LYPD1Q8N2G4 141 aa6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 ERHP84090 104 aaKnown RBP6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 PRO3102Q9H379 93 aa6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 C10orf113Q5VZT2 155 aa6.62□□□□□ -1.35
CTDSPL-201ENST00000273179 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
CTDSPL-201ENST00000273179 RITA1Q96K30 269 aa6.61□□□□□ -1.35
CTDSPL-201ENST00000273179 CNOT1A5YKK6 2376 aaKnown RBP6.61□□□□□ -1.35
CTDSPL-201ENST00000273179 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
CTDSPL-201ENST00000273179 ATMQ13315 3056 aa6.61□□□□□ -1.35
CTDSPL-201ENST00000273179 CACNA1HO95180 2353 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 IGHV3-64A0A075B6Q5 118 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 GGNQ86UU5 652 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 TECTAO75443 2155 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 IGHV3OR16-13A0A075B7E8 117 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 LY6G6EA0A0G2JKS1 128 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 DEFB108BQ8NET1 73 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 U3KQA8 63 aa6.6□□□□□ -1.35
CTDSPL-201ENST00000273179 IGHV6-1A0A0B4J1U7 121 aa6.59□□□□□ -1.35
CTDSPL-201ENST00000273179 GVINP1Q7Z2Y8 2422 aa6.59□□□□□ -1.35
CTDSPL-201ENST00000273179 SDHAF1A6NFY7 115 aa6.59□□□□□ -1.35
CTDSPL-201ENST00000273179 C11orf72Q8NBR9 251 aa6.59□□□□□ -1.35
CTDSPL-201ENST00000273179 SMCR5Q8TEV8 140 aa6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 A0A0G2JRQ6 117 aa6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 B3GALT5-AS1P59052 145 aa6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 TNCP24821 2201 aa6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 KLF14Q8TD94 323 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 UBE2D4Q9Y2X8 147 aa6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 RIF1Q5UIP0 2472 aaKnown RBP6.58□□□□□ -1.36
CTDSPL-201ENST00000273179 SORL1Q92673 2214 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 Q0VFX4 171 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 DMXL2Q8TDJ6 3036 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 CACNA1GO43497 2377 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 IGHV3-43A0A0B4J1X8 118 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 A0A0J9YY99 117 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 DEFB108AA8MXU0 73 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 IGHV3-43DP0DP04 118 aa6.57□□□□□ -1.36
CTDSPL-201ENST00000273179 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms