RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ODF1Q14990 250 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 CCL18P55774 89 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 V9GYY9 64 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 TEX22C9J3V5 150 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 SPAG11BQ08648 103 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 Q8N9W7 124 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 PRR4Q16378 134 aa12.88□□□□□ -0.35
TSPAN3-201ENST00000267970 ZFP36P26651 326 aaKnown RBP12.87□□□□□ -0.35
TSPAN3-201ENST00000267970 CASC2Q6XLA1 102 aa12.87□□□□□ -0.35
TSPAN3-201ENST00000267970 C5orf56Q8N8D9 126 aa12.87□□□□□ -0.35
TSPAN3-201ENST00000267970 WISP2O76076 250 aa12.87□□□□□ -0.35
TSPAN3-201ENST00000267970 IGFL3Q6UXB1 125 aa12.87□□□□□ -0.35
TSPAN3-201ENST00000267970 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
TSPAN3-201ENST00000267970 E9PLD3 99 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 NDUFA1O15239 70 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 FANCD2OSQ96PS1 177 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 C2orf70A6NJV1 201 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 ENHOQ6UWT2 76 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 WFDC10BQ8IUB3 73 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 SNURFQ9Y675 71 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 TNCP24821 2201 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 J3QKU1 62 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 DIRC1Q969H9 104 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 TANC2Q9HCD6 1990 aa12.86□□□□□ -0.35
TSPAN3-201ENST00000267970 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 FAM236DA0A1B0GTK5 79 aa12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 FAM236CP0DP71 79 aa12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 MALRD1Q5VYJ5 2156 aa12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 LINC00322Q6ZN03 302 aaPredicted RBP12.85□□□□□ -0.35
TSPAN3-201ENST00000267970 C9orf66Q5T8R8 295 aa12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 H3BUA1 57 aa12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 TMEM263Q8WUH6 116 aaKnown RBP12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 ZNF80P51504 273 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 NDUFA11Q86Y39 141 aa12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 OBSL1O75147 1896 aa12.84□□□□□ -0.35
TSPAN3-201ENST00000267970 RNF138Q8WVD3 245 aa12.83□□□□□ -0.35
TSPAN3-201ENST00000267970 DCANP1Q8TF63 244 aa12.83□□□□□ -0.36
TSPAN3-201ENST00000267970 C4orf48Q5BLP8 95 aa12.83□□□□□ -0.36
TSPAN3-201ENST00000267970 THSD7BQ9C0I4 1608 aa12.83□□□□□ -0.36
TSPAN3-201ENST00000267970 JMJD7-PLA2G4BH0Y9G9 81 aa12.83□□□□□ -0.36
TSPAN3-201ENST00000267970 DENND4CQ5VZ89 1909 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 TMEM256-PLSCR3K7ERE1 68 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 BPY2O14599 106 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 HIGD2AQ9BW72 106 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 FAM240AA0A1B0GVK7 77 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
TSPAN3-201ENST00000267970 IGHV1-58A0A0C4DH39 117 aa12.81□□□□□ -0.36
TSPAN3-201ENST00000267970 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
TSPAN3-201ENST00000267970 IGF1P05019 195 aa12.81□□□□□ -0.36
TSPAN3-201ENST00000267970 DEFB113Q30KQ7 82 aa12.81□□□□□ -0.36
TSPAN3-201ENST00000267970 LENEPQ9Y5L5 61 aa12.81□□□□□ -0.36
TSPAN3-201ENST00000267970 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
TSPAN3-201ENST00000267970 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
TSPAN3-201ENST00000267970 LINC00269Q8N2A0 174 aa12.8□□□□□ -0.36
TSPAN3-201ENST00000267970 Q8N7P7 452 aa12.8□□□□□ -0.36
TSPAN3-201ENST00000267970 USP17L23D6RBM5 183 aa12.79□□□□□ -0.36
TSPAN3-201ENST00000267970 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
TSPAN3-201ENST00000267970 NDUFC2-KCTD14E9PQ53 114 aa12.79□□□□□ -0.36
TSPAN3-201ENST00000267970 PIK3CD-AS1Q5SR53 167 aa12.79□□□□□ -0.36
TSPAN3-201ENST00000267970 LINC00643Q86TS7 51 aa12.78□□□□□ -0.36
TSPAN3-201ENST00000267970 CACNA1HO95180 2353 aa12.78□□□□□ -0.36
TSPAN3-201ENST00000267970 COX7BP24311 80 aa12.78□□□□□ -0.36
TSPAN3-201ENST00000267970 A8MZ25 164 aa12.77□□□□□ -0.36
TSPAN3-201ENST00000267970 HIGD1BQ9P298 99 aa12.77□□□□□ -0.36
TSPAN3-201ENST00000267970 A0A0J9YXY3 114 aa12.77□□□□□ -0.37
TSPAN3-201ENST00000267970 HRCT1Q6UXD1 115 aa12.77□□□□□ -0.37
TSPAN3-201ENST00000267970 H3BT86 120 aa12.76□□□□□ -0.37
TSPAN3-201ENST00000267970 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
TSPAN3-201ENST00000267970 PROK1P58294 105 aa12.76□□□□□ -0.37
TSPAN3-201ENST00000267970 Q6ZTI0 123 aa12.76□□□□□ -0.37
TSPAN3-201ENST00000267970 DENND4AQ7Z401 1863 aa12.76□□□□□ -0.37
TSPAN3-201ENST00000267970 CTRLP40313 264 aa12.76□□□□□ -0.37
TSPAN3-201ENST00000267970 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
TSPAN3-201ENST00000267970 NOTCH4Q99466 2003 aa12.75□□□□□ -0.37
TSPAN3-201ENST00000267970 LINC00467Q9BRT7 94 aa12.75□□□□□ -0.37
TSPAN3-201ENST00000267970 A6NED7 52 aa12.75□□□□□ -0.37
TSPAN3-201ENST00000267970 MIAQ16674 131 aa12.75□□□□□ -0.37
TSPAN3-201ENST00000267970 RIF1Q5UIP0 2472 aaKnown RBP12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 LINC00526Q96FQ7 95 aa12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 KIF26AQ9ULI4 1882 aaPredicted RBP12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 UQCRQO14949 82 aa12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 ADORA2A-AS1P86434 159 aa12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 POM121L12Q8N7R1 296 aa12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 MAPKAPK5-AS1Q8N8E1 139 aa12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 MSMPQ1L6U9 139 aa12.74□□□□□ -0.37
TSPAN3-201ENST00000267970 TRBV6-1A0A0K0K1D8 114 aa12.73□□□□□ -0.37
TSPAN3-201ENST00000267970 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
TSPAN3-201ENST00000267970 CCDC179H3BU77 68 aa12.73□□□□□ -0.37
TSPAN3-201ENST00000267970 C20orf203Q8NBC4 194 aa12.73□□□□□ -0.37
TSPAN3-201ENST00000267970 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
TSPAN3-201ENST00000267970 SRCAPQ6ZRS2 3230 aa12.73□□□□□ -0.37
TSPAN3-201ENST00000267970 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
TSPAN3-201ENST00000267970 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
TSPAN3-201ENST00000267970 KRTAP27-1Q3LI81 207 aa12.72□□□□□ -0.37
TSPAN3-201ENST00000267970 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms