RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 DKK1O94907 266 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 TRBV6-1A0A0K0K1D8 114 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 MRPS12O15235 138 aaKnown RBP4.46□□□□□ -1.7
VCAN-201ENST00000265077 LINC01356Q8N9X3 169 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.7
VCAN-201ENST00000265077 GDF5OSQ5U4N7 250 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 KIR2DL5BQ8NHK3 375 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 PROK2Q9HC23 129 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 CLEC2BQ92478 149 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 DYNAPQ8N1N2 210 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 TRAV23DV6A0A075B6W5 121 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 KLHL30-AS1Q8NEE0 82 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 MDFICQ9P1T7 246 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
VCAN-201ENST00000265077 USP17L23D6RBM5 183 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 IGHV1-69P01742 117 aa4.45□□□□□ -1.7
VCAN-201ENST00000265077 EGR2P11161 476 aaPredicted RBP4.44□□□□□ -1.7
VCAN-201ENST00000265077 GP9P14770 177 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 COL8A2P25067 703 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 CFHR4Q92496 578 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 TRAV26-2A0A0B4J265 109 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 MSMBP08118 114 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 LOXL1Q08397 574 aaPredicted RBP4.44□□□□□ -1.7
VCAN-201ENST00000265077 DEFB131AP59861 70 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 IGFL3Q6UXB1 125 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 NBL1P41271 181 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 SUMO4Q6EEV6 95 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 Q6ZSR3 168 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 UPK3BQ9BT76 320 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 NOTCH1P46531 2555 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 LINC01619G3V211 115 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 H0YGX0 51 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 WIPF1O43516 503 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 LOXP28300 417 aaPredicted RBP4.44□□□□□ -1.7
VCAN-201ENST00000265077 LYPD6Q86Y78 171 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 ZNRD1Q9P1U0 126 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 IGHV7-4-1A0A0J9YVY3 117 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 OVOL3O00110 214 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 BRD3OSQ6XYD6 125 aa4.44□□□□□ -1.7
VCAN-201ENST00000265077 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 LHBP01229 141 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 ZNF491Q8N8L2 437 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 BPESC1Q9GZL8 116 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 UBE2E2Q96LR5 201 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 DAND5Q8N907 189 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 NPBQ8NG41 125 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 FOXE3Q13461 319 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 RNF138Q8WVD3 245 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 ZNF524Q96C55 264 aa4.43□□□□□ -1.7
VCAN-201ENST00000265077 G3V318 75 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 ZNF561-AS1K7EIQ3 104 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 DAZ2Q13117 558 aaKnown RBP4.42□□□□□ -1.7
VCAN-201ENST00000265077 DAZ4Q86SG3 579 aaKnown RBP4.42□□□□□ -1.7
VCAN-201ENST00000265077 DAZ3Q9NR90 486 aaKnown RBP4.42□□□□□ -1.7
VCAN-201ENST00000265077 UBE2BP63146 152 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 MBD6Q96DN6 1003 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 KLK9Q9UKQ9 250 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 TRBV7-7A0A0K0K1E9 115 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 FAM167A-AS1Q96KT0 104 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 IGLV2-8P01709 118 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 IGHV3-53P01767 116 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 WFDC9Q8NEX5 89 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 AJUBAQ96IF1 538 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 WISP1O95388 367 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 TRBV30A0A0K0K1B3 111 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 K7EIM0 57 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 UBE2DNLQ8IWF7 75 aa4.42□□□□□ -1.7
VCAN-201ENST00000265077 PCSK5Q92824 1860 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 DEFB104AQ8WTQ1 72 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 FLNAP21333 2647 aaKnown RBP4.41□□□□□ -1.7
VCAN-201ENST00000265077 LY6G6EA0A0G2JKS1 128 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 BLCAPP62952 87 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 TPSG1Q9NRR2 321 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 U3KQA8 63 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 DEFB130BP0DP73 79 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 DEFB130AP0DP74 79 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 NSUN5P1Q3KNT7 163 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 Q9H8V8 135 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 C11orf53Q8IXP5 236 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 PYGO1Q9Y3Y4 419 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 COX7A2LO14548 114 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 IGKV1-17P01599 117 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 APOC4P55056 127 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 RMI2Q96E14 147 aa4.41□□□□□ -1.7
VCAN-201ENST00000265077 PSCAO43653 123 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 TRIAP1O43715 76 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 TOMM6Q96B49 74 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 JMJD7-PLA2G4BH0Y9G9 81 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 C9orf85Q96MD7 179 aa4.4□□□□□ -1.7
VCAN-201ENST00000265077 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms