RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 VPS13DQ5THJ4 4388 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 RPL36AP83881 106 aaKnown RBP11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 ESRGQ1W209 222 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 LGALS9CQ6DKI2 356 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 RPL36ALQ969Q0 106 aaKnown RBP11.5□□□□□ -0.57
CHCHD3-201ENST00000262570 SACSQ9NZJ4 4579 aa11.49□□□□□ -0.57
CHCHD3-201ENST00000262570 RASL11AQ6T310 242 aa11.49□□□□□ -0.57
CHCHD3-201ENST00000262570 DNAH1Q9P2D7 4330 aa11.49□□□□□ -0.57
CHCHD3-201ENST00000262570 S100A1P23297 94 aa11.48□□□□□ -0.57
CHCHD3-201ENST00000262570 CCL18P55774 89 aa11.48□□□□□ -0.57
CHCHD3-201ENST00000262570 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
CHCHD3-201ENST00000262570 ATP6V0E2Q8NHE4 81 aa11.48□□□□□ -0.57
CHCHD3-201ENST00000262570 LINC00476Q8WZB0 136 aa11.48□□□□□ -0.57
CHCHD3-201ENST00000262570 NIT2Q9NQR4 276 aa11.48□□□□□ -0.57
CHCHD3-201ENST00000262570 ALMS1Q8TCU4 4167 aa11.47□□□□□ -0.57
CHCHD3-201ENST00000262570 UBE2D3P61077 147 aa11.47□□□□□ -0.57
CHCHD3-201ENST00000262570 UBE2D2P62837 147 aa11.47□□□□□ -0.57
CHCHD3-201ENST00000262570 DNAJC30Q96LL9 226 aa11.47□□□□□ -0.57
CHCHD3-201ENST00000262570 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
CHCHD3-201ENST00000262570 MRAP2Q96G30 205 aa11.46□□□□□ -0.57
CHCHD3-201ENST00000262570 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 ELOBQ15370 118 aa11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 MRPL51Q4U2R6 128 aaKnown RBP11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 GTSF1LQ9H1H1 148 aa11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 LY6G6CO95867 125 aa11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 TIRAPP58753 221 aa11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 RPL39LQ96EH5 51 aaKnown RBP11.45□□□□□ -0.58
CHCHD3-201ENST00000262570 TMEM136Q6ZRR5 245 aa11.44□□□□□ -0.58
CHCHD3-201ENST00000262570 UBE2DNLQ8IWF7 75 aa11.44□□□□□ -0.58
CHCHD3-201ENST00000262570 LCE6AA0A183 80 aa11.43□□□□□ -0.58
CHCHD3-201ENST00000262570 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
CHCHD3-201ENST00000262570 RPS10P46783 165 aaKnown RBP11.43□□□□□ -0.58
CHCHD3-201ENST00000262570 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
CHCHD3-201ENST00000262570 TRBV24-1A0A075B6N3 115 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 TGIF2-C20orf24A0A0A6YYL0 155 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 NCR2O95944 276 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 DAZ4Q86SG3 579 aaKnown RBP11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 YPEL4Q96NS1 127 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 UPK3BQ9BT76 320 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 DAZ3Q9NR90 486 aaKnown RBP11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 SMCO4Q9NRQ5 59 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 HYDINQ4G0P3 5121 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 KMT2AQ03164 3969 aa11.42□□□□□ -0.58
CHCHD3-201ENST00000262570 IGHV3-38A0A0C4DH36 116 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 CKS2P33552 79 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 COX19Q49B96 90 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 CBLN2Q8IUK8 224 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 GNB1LQ9BYB4 327 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 RYR2Q92736 4967 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 D6R8Y8 96 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 PPP1R17O96001 155 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 PPBPP02775 128 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 NRACQ8N912 160 aa11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.41□□□□□ -0.58
CHCHD3-201ENST00000262570 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
CHCHD3-201ENST00000262570 HLA-DQA1P01909 254 aa11.4□□□□□ -0.58
CHCHD3-201ENST00000262570 LELP1Q5T871 98 aa11.4□□□□□ -0.58
CHCHD3-201ENST00000262570 ORMDL3Q8N138 153 aa11.39□□□□□ -0.59
CHCHD3-201ENST00000262570 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
CHCHD3-201ENST00000262570 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
CHCHD3-201ENST00000262570 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
CHCHD3-201ENST00000262570 Q9H8V8 135 aa11.38□□□□□ -0.59
CHCHD3-201ENST00000262570 TNFRSF6BO95407 300 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 MT-ND6P03923 174 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 SUMO2P61956 95 aaKnown RBP11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 TMEM97Q5BJF2 176 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 NTM-AS1Q6ZSK4 140 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 PHOX2AO14813 284 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 APCSP02743 223 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 C20orf78Q9BR46 151 aa11.37□□□□□ -0.59
CHCHD3-201ENST00000262570 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
CHCHD3-201ENST00000262570 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
CHCHD3-201ENST00000262570 NPYP01303 97 aa11.36□□□□□ -0.59
CHCHD3-201ENST00000262570 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
CHCHD3-201ENST00000262570 PRELID3AQ96N28 172 aa11.36□□□□□ -0.59
CHCHD3-201ENST00000262570 RYR3Q15413 4870 aa11.36□□□□□ -0.59
CHCHD3-201ENST00000262570 SIVA1O15304 175 aa11.35□□□□□ -0.59
CHCHD3-201ENST00000262570 KIAA1644Q3SXP7 199 aa11.35□□□□□ -0.59
CHCHD3-201ENST00000262570 MRPL18Q9H0U6 180 aaKnown RBP11.35□□□□□ -0.59
CHCHD3-201ENST00000262570 LAMTOR2Q9Y2Q5 125 aa11.35□□□□□ -0.59
CHCHD3-201ENST00000262570 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
CHCHD3-201ENST00000262570 I3L3M4 83 aa11.34□□□□□ -0.59
CHCHD3-201ENST00000262570 SCO1O75880 301 aa11.34□□□□□ -0.59
CHCHD3-201ENST00000262570 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
CHCHD3-201ENST00000262570 COTL1Q14019 142 aa11.34□□□□□ -0.59
CHCHD3-201ENST00000262570 DEFB104AQ8WTQ1 72 aa11.34□□□□□ -0.59
CHCHD3-201ENST00000262570 VCYO14598 125 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 PMCHP20382 165 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 FABP9Q0Z7S8 132 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 IQCJQ1A5X6 159 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
CHCHD3-201ENST00000262570 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms