RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 SPINK13Q1W4C9 94 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 Q8N1Y9 231 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 CSMD2Q7Z408 3487 aa13.35□□□□□ -0.27
TRAF4-201ENST00000262395 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
TRAF4-201ENST00000262395 C9JAW5 83 aa13.34□□□□□ -0.27
TRAF4-201ENST00000262395 IGHG2P01859 326 aa13.34□□□□□ -0.27
TRAF4-201ENST00000262395 RNASE13Q5GAN3 156 aaKnown RBP13.34□□□□□ -0.27
TRAF4-201ENST00000262395 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
TRAF4-201ENST00000262395 TEX29Q8N6K0 151 aa13.34□□□□□ -0.27
TRAF4-201ENST00000262395 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
TRAF4-201ENST00000262395 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.27
TRAF4-201ENST00000262395 P0DMU3 169 aa13.33□□□□□ -0.27
TRAF4-201ENST00000262395 FAM231AP0DMU4 169 aa13.33□□□□□ -0.27
TRAF4-201ENST00000262395 FAM231CP0DMU5 169 aa13.33□□□□□ -0.27
TRAF4-201ENST00000262395 GAGE5Q13069 117 aa13.33□□□□□ -0.28
TRAF4-201ENST00000262395 GAGE6Q13070 117 aa13.33□□□□□ -0.28
TRAF4-201ENST00000262395 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
TRAF4-201ENST00000262395 M0QY20 66 aa13.33□□□□□ -0.28
TRAF4-201ENST00000262395 ELANEP08246 267 aa13.33□□□□□ -0.28
TRAF4-201ENST00000262395 LYRM7Q5U5X0 104 aa13.33□□□□□ -0.28
TRAF4-201ENST00000262395 IGHV3-16A0A0C4DH30 117 aa13.32□□□□□ -0.28
TRAF4-201ENST00000262395 Q1RN00 199 aa13.32□□□□□ -0.28
TRAF4-201ENST00000262395 CEMP1Q6PRD7 247 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-201ENST00000262395 DUX5Q96PT3 197 aa13.32□□□□□ -0.28
TRAF4-201ENST00000262395 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
TRAF4-201ENST00000262395 ID1P41134 155 aa13.32□□□□□ -0.28
TRAF4-201ENST00000262395 LGALS9O00182 355 aa13.31□□□□□ -0.28
TRAF4-201ENST00000262395 PRM2P04554 102 aa13.31□□□□□ -0.28
TRAF4-201ENST00000262395 SPXQ9BT56 116 aa13.31□□□□□ -0.28
TRAF4-201ENST00000262395 NPC2P61916 151 aa13.3□□□□□ -0.28
TRAF4-201ENST00000262395 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
TRAF4-201ENST00000262395 SLC25A20O43772 301 aa13.3□□□□□ -0.28
TRAF4-201ENST00000262395 RPL32P62910 135 aaKnown RBP13.3□□□□□ -0.28
TRAF4-201ENST00000262395 ZNF22P17026 224 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-201ENST00000262395 PROK1P58294 105 aa13.29□□□□□ -0.28
TRAF4-201ENST00000262395 ITPR1Q14643 2758 aa13.29□□□□□ -0.28
TRAF4-201ENST00000262395 A6NDX4 124 aa13.29□□□□□ -0.28
TRAF4-201ENST00000262395 IGHV3-33P01772 117 aa13.29□□□□□ -0.28
TRAF4-201ENST00000262395 UTP20O75691 2785 aaKnown RBP13.29□□□□□ -0.28
TRAF4-201ENST00000262395 RHODO00212 210 aa13.28□□□□□ -0.28
TRAF4-201ENST00000262395 PRSS2P07478 247 aa13.28□□□□□ -0.28
TRAF4-201ENST00000262395 TRAV8-3A0A0A6YYJ7 113 aa13.28□□□□□ -0.28
TRAF4-201ENST00000262395 LEPROTO15243 131 aa13.28□□□□□ -0.28
TRAF4-201ENST00000262395 C9orf85Q96MD7 179 aa13.28□□□□□ -0.28
TRAF4-201ENST00000262395 VCX2Q9H322 139 aa13.28□□□□□ -0.28
TRAF4-201ENST00000262395 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.28
TRAF4-201ENST00000262395 A8MZ25 164 aa13.27□□□□□ -0.28
TRAF4-201ENST00000262395 TMEM263Q8WUH6 116 aaKnown RBP13.27□□□□□ -0.28
TRAF4-201ENST00000262395 Q9UF83 564 aa13.27□□□□□ -0.28
TRAF4-201ENST00000262395 ZANQ9Y493 2812 aa13.27□□□□□ -0.28
TRAF4-201ENST00000262395 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
TRAF4-201ENST00000262395 C20orf203Q8NBC4 194 aa13.27□□□□□ -0.29
TRAF4-201ENST00000262395 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 KNCNA6PVL3 124 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 SHISA2Q6UWI4 295 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 PRRC2AP48634 2157 aaKnown RBP13.26□□□□□ -0.29
TRAF4-201ENST00000262395 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 AVPP01185 164 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 Q6ZSV7 163 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 IGHV1OR15-1A0A075B7D0 117 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 CFAP161Q6P656 301 aa13.26□□□□□ -0.29
TRAF4-201ENST00000262395 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
TRAF4-201ENST00000262395 A0A0J9YX75 114 aa13.25□□□□□ -0.29
TRAF4-201ENST00000262395 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
TRAF4-201ENST00000262395 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-201ENST00000262395 NTN5Q8WTR8 489 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-201ENST00000262395 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-201ENST00000262395 H3BUA1 57 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 SYNJ2BPP57105 145 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 IGHV4-30-2A0A087WSY4 118 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 GAGE2BQ13066 116 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 SMIM20Q8N5G0 67 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
TRAF4-201ENST00000262395 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 I3L3M4 83 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 HERV-K104P63124 156 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 PIMREGQ9BSJ6 248 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 CCDC179H3BU77 68 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 IGHV3-30-3P0DP02 117 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 CD28P10747 220 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
TRAF4-201ENST00000262395 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
TRAF4-201ENST00000262395 SNCGO76070 127 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 GNLYP22749 145 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 RHOHQ15669 191 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 TEX49A0A1B0GTD5 131 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 TMEM262E9PQX1 116 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 CRLF1O75462 422 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 IGHV4-59P01825 116 aa13.22□□□□□ -0.29
TRAF4-201ENST00000262395 TTC32Q5I0X7 151 aa13.21□□□□□ -0.29
TRAF4-201ENST00000262395 ADAMTSL4-AS1Q5T5F5 129 aa13.21□□□□□ -0.29
TRAF4-201ENST00000262395 FLNCQ14315 2725 aa13.21□□□□□ -0.3
TRAF4-201ENST00000262395 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.3
TRAF4-201ENST00000262395 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.3
TRAF4-201ENST00000262395 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.3
TRAF4-201ENST00000262395 POLQO75417 2590 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms