RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 A0A0U1RRA0 63 aa12.07□□□□□ -0.48
SNCAIP-202ENST00000261368 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
SNCAIP-202ENST00000261368 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
SNCAIP-202ENST00000261368 IGIPA6NJ69 53 aa12.07□□□□□ -0.48
SNCAIP-202ENST00000261368 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 DEFB136Q30KP8 78 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 DEFB112Q30KQ8 113 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 DGAT2L7PQ6IED9 249 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 C10orf105Q8TEF2 133 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 AVPP01185 164 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 CFC1P0CG37 223 aa12.06□□□□□ -0.48
SNCAIP-202ENST00000261368 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
SNCAIP-202ENST00000261368 KLLNB2CW77 178 aa12.05□□□□□ -0.48
SNCAIP-202ENST00000261368 HIST2H2BDQ6DRA6 164 aa12.05□□□□□ -0.48
SNCAIP-202ENST00000261368 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
SNCAIP-202ENST00000261368 IGHV3-16A0A0C4DH30 117 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 DEFB131AP59861 70 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 ANKRD17O75179 2603 aaKnown RBP12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 FLNCQ14315 2725 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 PROK1P58294 105 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 LINC00315P59091 139 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 MUSTN1Q8IVN3 82 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 H3BUA1 57 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 I3L3M4 83 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 CFAP126Q5VTH2 177 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 DCANP1Q8TF63 244 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 KIF25-AS1Q9Y6Z4 181 aa12.04□□□□□ -0.48
SNCAIP-202ENST00000261368 B4DSR2 109 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 PPDPFLQ8WWR9 84 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 IGHV4OR15-8A0A075B7B6 117 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 A0A087WW49 117 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 A0A0J9YX75 114 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 PRO0461Q9UI25 63 aa12.03□□□□□ -0.48
SNCAIP-202ENST00000261368 COX6B1P14854 86 aa12.02□□□□□ -0.48
SNCAIP-202ENST00000261368 UBE2D1P51668 147 aa12.02□□□□□ -0.48
SNCAIP-202ENST00000261368 NFE4Q86UQ8 179 aa12.02□□□□□ -0.48
SNCAIP-202ENST00000261368 TIMM21Q9BVV7 248 aa12.02□□□□□ -0.48
SNCAIP-202ENST00000261368 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.48
SNCAIP-202ENST00000261368 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
SNCAIP-202ENST00000261368 M0QY20 66 aa12.02□□□□□ -0.49
SNCAIP-202ENST00000261368 SLC25A29Q8N8R3 303 aa12.02□□□□□ -0.49
SNCAIP-202ENST00000261368 IGHV3-30P01768 117 aa12.02□□□□□ -0.49
SNCAIP-202ENST00000261368 MT-ATP8P03928 68 aa12.02□□□□□ -0.49
SNCAIP-202ENST00000261368 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.49
SNCAIP-202ENST00000261368 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
SNCAIP-202ENST00000261368 C19orf54Q5BKX5 351 aa12.01□□□□□ -0.49
SNCAIP-202ENST00000261368 ANKRD29Q8N6D5 301 aa12.01□□□□□ -0.49
SNCAIP-202ENST00000261368 SLC25A20O43772 301 aa12.01□□□□□ -0.49
SNCAIP-202ENST00000261368 TCTEX1D4Q5JR98 221 aa12.01□□□□□ -0.49
SNCAIP-202ENST00000261368 LINC01587Q99440 93 aa12.01□□□□□ -0.49
SNCAIP-202ENST00000261368 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 TRBV20-1A0A075B6N2 111 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 TRBV27A0A0K0K1C4 114 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 C11orf44Q8N8P7 122 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 PRRC2AP48634 2157 aaKnown RBP12□□□□□ -0.49
SNCAIP-202ENST00000261368 DOPEY1Q5JWR5 2465 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 TEN1Q86WV5 123 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 ZNF625Q96I27 306 aaPredicted RBP12□□□□□ -0.49
SNCAIP-202ENST00000261368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
SNCAIP-202ENST00000261368 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
SNCAIP-202ENST00000261368 LINC01619G3V211 115 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 HOXD3P31249 432 aaPredicted RBP12□□□□□ -0.49
SNCAIP-202ENST00000261368 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 ZANQ9Y493 2812 aa12□□□□□ -0.49
SNCAIP-202ENST00000261368 A8MZ25 164 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 SPATA25Q9BR10 227 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 RHODO00212 210 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 LGALS9O00182 355 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 LEPROTO15243 131 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 FAM19A4Q96LR4 140 aa11.99□□□□□ -0.49
SNCAIP-202ENST00000261368 K7EMT4 169 aa11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 TRBV7-9A0A0J9YWB2 115 aa11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 CRIP2P52943 208 aaPredicted RBP11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 SLURP1P55000 103 aa11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 RHOHQ15669 191 aa11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 DAND5Q8N907 189 aa11.98□□□□□ -0.49
SNCAIP-202ENST00000261368 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
SNCAIP-202ENST00000261368 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
SNCAIP-202ENST00000261368 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
SNCAIP-202ENST00000261368 K7EQG2 157 aa11.96□□□□□ -0.49
SNCAIP-202ENST00000261368 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
SNCAIP-202ENST00000261368 TMEM223A0PJW6 202 aa11.96□□□□□ -0.5
SNCAIP-202ENST00000261368 SCGB1A1P11684 91 aa11.96□□□□□ -0.5
SNCAIP-202ENST00000261368 NXPH4O95158 308 aa11.95□□□□□ -0.5
SNCAIP-202ENST00000261368 XGP55808 180 aa11.95□□□□□ -0.5
SNCAIP-202ENST00000261368 C9orf85Q96MD7 179 aa11.95□□□□□ -0.5
SNCAIP-202ENST00000261368 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-202ENST00000261368 IGHV3-53P01767 116 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms