RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SUMO4Q6EEV6 95 aa12.09□□□□□ -0.47
SNRPA1-201ENST00000254193 TMEM241Q24JQ0 296 aa12.08□□□□□ -0.48
SNRPA1-201ENST00000254193 CT83Q5H943 113 aa12.08□□□□□ -0.48
SNRPA1-201ENST00000254193 PGLYRP4Q96LB8 373 aa12.08□□□□□ -0.48
SNRPA1-201ENST00000254193 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
SNRPA1-201ENST00000254193 FAM74A3Q4VXF1 159 aa12.07□□□□□ -0.48
SNRPA1-201ENST00000254193 SPATA12Q7Z6I5 190 aa12.07□□□□□ -0.48
SNRPA1-201ENST00000254193 DAZ4Q86SG3 579 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-201ENST00000254193 Q9HAA7 133 aa12.07□□□□□ -0.48
SNRPA1-201ENST00000254193 DAZ3Q9NR90 486 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-201ENST00000254193 OSTCQ9NRP0 149 aa12.07□□□□□ -0.48
SNRPA1-201ENST00000254193 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
SNRPA1-201ENST00000254193 H7C1H1 209 aa12.06□□□□□ -0.48
SNRPA1-201ENST00000254193 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
SNRPA1-201ENST00000254193 RPL23P62829 140 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-201ENST00000254193 NIT1Q86X76 327 aa12.06□□□□□ -0.48
SNRPA1-201ENST00000254193 C16orf90A8MZG2 172 aa12.05□□□□□ -0.48
SNRPA1-201ENST00000254193 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-201ENST00000254193 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
SNRPA1-201ENST00000254193 ISOC2Q96AB3 205 aa12.05□□□□□ -0.48
SNRPA1-201ENST00000254193 SMDT1Q9H4I9 107 aa12.05□□□□□ -0.48
SNRPA1-201ENST00000254193 ADIRFQ15847 76 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 URGCP-MRPS24S4R325 110 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 V9GYV3 84 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 PKD1P98161 4303 aa12.04□□□□□ -0.48
SNRPA1-201ENST00000254193 A0A087WTM6 91 aa12.03□□□□□ -0.48
SNRPA1-201ENST00000254193 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
SNRPA1-201ENST00000254193 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
SNRPA1-201ENST00000254193 DNAH11Q96DT5 4516 aa12.03□□□□□ -0.48
SNRPA1-201ENST00000254193 A0A087WX48 190 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 PSCAO43653 123 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 RAB14P61106 215 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 LAGE3Q14657 143 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 SMIM15Q7Z3B0 74 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 GFRA4Q9GZZ7 299 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 NIT2Q9NQR4 276 aa12.02□□□□□ -0.49
SNRPA1-201ENST00000254193 EREGO14944 169 aa12.01□□□□□ -0.49
SNRPA1-201ENST00000254193 FUSP35637 526 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNRPA1-201ENST00000254193 GATD1Q8NB37 220 aa12.01□□□□□ -0.49
SNRPA1-201ENST00000254193 BORCS7Q96B45 105 aa12.01□□□□□ -0.49
SNRPA1-201ENST00000254193 CHCHD5Q9BSY4 110 aa12.01□□□□□ -0.49
SNRPA1-201ENST00000254193 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
SNRPA1-201ENST00000254193 A0A1B0GUT8 65 aa12□□□□□ -0.49
SNRPA1-201ENST00000254193 FAM231BA6NCW3 169 aa12□□□□□ -0.49
SNRPA1-201ENST00000254193 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
SNRPA1-201ENST00000254193 PKHD1P08F94 4074 aa12□□□□□ -0.49
SNRPA1-201ENST00000254193 TRAV8-3A0A0A6YYJ7 113 aa11.99□□□□□ -0.49
SNRPA1-201ENST00000254193 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
SNRPA1-201ENST00000254193 DEFB104AQ8WTQ1 72 aa11.99□□□□□ -0.49
SNRPA1-201ENST00000254193 CHCHD7Q9BUK0 85 aa11.99□□□□□ -0.49
SNRPA1-201ENST00000254193 DYNC1H1Q14204 4646 aaKnown RBP11.98□□□□□ -0.49
SNRPA1-201ENST00000254193 MPV17L2Q567V2 206 aa11.98□□□□□ -0.49
SNRPA1-201ENST00000254193 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
SNRPA1-201ENST00000254193 KIAA1109Q2LD37 5005 aa11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 GAGE6Q13070 117 aa11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 ELOBQ15370 118 aa11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 UBE2WQ96B02 151 aa11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
SNRPA1-201ENST00000254193 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 LRCOL1A6NCL2 159 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 IFITM2Q01629 132 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 ATRAIDQ6UW56 229 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 Q8N976 141 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 NAT8BQ9UHF3 227 aa11.96□□□□□ -0.49
SNRPA1-201ENST00000254193 RIGQ13278 110 aa11.95□□□□□ -0.5
SNRPA1-201ENST00000254193 CLLU1Q5K131 121 aa11.95□□□□□ -0.5
SNRPA1-201ENST00000254193 FRZBQ92765 325 aa11.95□□□□□ -0.5
SNRPA1-201ENST00000254193 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
SNRPA1-201ENST00000254193 SMIM27A0A1W2PRY6 76 aa11.94□□□□□ -0.5
SNRPA1-201ENST00000254193 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
SNRPA1-201ENST00000254193 PKIAP61925 76 aa11.94□□□□□ -0.5
SNRPA1-201ENST00000254193 RBX1P62877 108 aa11.94□□□□□ -0.5
SNRPA1-201ENST00000254193 MAPKAPK5-AS1Q8N8E1 139 aa11.94□□□□□ -0.5
SNRPA1-201ENST00000254193 IGKV2D-24A0A075B6R9 120 aa11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 COTL1Q14019 142 aa11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 ENHOQ6UWT2 76 aa11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 AMN1Q8IY45 258 aa11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
SNRPA1-201ENST00000254193 LECT2O14960 151 aa11.92□□□□□ -0.5
SNRPA1-201ENST00000254193 RAB4AP20338 218 aa11.92□□□□□ -0.5
SNRPA1-201ENST00000254193 WFDC2Q14508 124 aa11.92□□□□□ -0.5
SNRPA1-201ENST00000254193 RMI2Q96E14 147 aa11.92□□□□□ -0.5
SNRPA1-201ENST00000254193 HERC2O95714 4834 aa11.92□□□□□ -0.5
SNRPA1-201ENST00000254193 AMTP48728 403 aa11.91□□□□□ -0.5
SNRPA1-201ENST00000254193 Q0VG73 95 aa11.91□□□□□ -0.5
SNRPA1-201ENST00000254193 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
SNRPA1-201ENST00000254193 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms