RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SEC11AP67812 179 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 SYT8Q8NBV8 401 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 WNK1Q9H4A3 2382 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 TMEM238LA0A1B0GVL6 79 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 TMEM238C9JI98 176 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 H3BMM0 161 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 RPL39P62891 51 aaKnown RBP13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 ZNF876PQ49A33 203 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 ZFP2Q6ZN57 461 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 PEMTQ9UBM1 199 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 TP53TG1Q9Y2A0 90 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 A0A1W2PRX2 142 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 HLA-DRB4P13762 266 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 ZNF256Q9Y2P7 627 aaPredicted RBP13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 HLA-DRB4X5D2U9 266 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 TRBV25-1A0A075B6N4 114 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 DYNLRB2Q8TF09 96 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 VPS25Q9BRG1 176 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 C16orf95Q9H693 158 aa13.74□□□□□ -0.21
PDLIM4-201ENST00000253754 PRSS29PA6NIE9 313 aa13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 M0QY20 66 aa13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 TSHBP01222 138 aa13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 AMMECR1LQ6DCA0 310 aa13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 CHAC1Q9BUX1 264 aa13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 OCIAD2Q56VL3 154 aa13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 NAA38Q9BRA0 125 aaKnown RBP13.73□□□□□ -0.21
PDLIM4-201ENST00000253754 VCYO14598 125 aa13.72□□□□□ -0.21
PDLIM4-201ENST00000253754 CD28P10747 220 aa13.72□□□□□ -0.21
PDLIM4-201ENST00000253754 RPL32P62910 135 aaKnown RBP13.72□□□□□ -0.21
PDLIM4-201ENST00000253754 CD300EQ496F6 205 aaPredicted RBP13.72□□□□□ -0.21
PDLIM4-201ENST00000253754 MAP6D1Q9H9H5 199 aa13.72□□□□□ -0.21
PDLIM4-201ENST00000253754 CYSLTR1Q9Y271 337 aa13.72□□□□□ -0.21
PDLIM4-201ENST00000253754 KIR2DL4Q99706 377 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 CST9LQ9H4G1 147 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 ATRQ13535 2644 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 TRGV11A0A075B6L2 103 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 DEFB114Q30KQ6 69 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 RAX2Q96IS3 184 aa13.71□□□□□ -0.21
PDLIM4-201ENST00000253754 C2CD3Q4AC94 2353 aa13.7□□□□□ -0.22
PDLIM4-201ENST00000253754 GCSHP23434 173 aa13.7□□□□□ -0.22
PDLIM4-201ENST00000253754 EMP1P54849 157 aa13.7□□□□□ -0.22
PDLIM4-201ENST00000253754 TRBV27A0A0K0K1C4 114 aa13.7□□□□□ -0.22
PDLIM4-201ENST00000253754 A6NDN8 102 aa13.7□□□□□ -0.22
PDLIM4-201ENST00000253754 RAB37Q96AX2 223 aa13.7□□□□□ -0.22
PDLIM4-201ENST00000253754 TRBV6-5A0A0K0K1A5 114 aa13.69□□□□□ -0.22
PDLIM4-201ENST00000253754 IGIPA6NJ69 53 aa13.69□□□□□ -0.22
PDLIM4-201ENST00000253754 FXYD2P54710 66 aa13.69□□□□□ -0.22
PDLIM4-201ENST00000253754 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
PDLIM4-201ENST00000253754 HIGD1BQ9P298 99 aa13.69□□□□□ -0.22
PDLIM4-201ENST00000253754 A8MTW9 85 aa13.69□□□□□ -0.22
PDLIM4-201ENST00000253754 PROK1P58294 105 aa13.68□□□□□ -0.22
PDLIM4-201ENST00000253754 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 TRAV2A0A0B4J234 112 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 H3BRM9 83 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 NDUFA7O95182 113 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 P0DMU3 169 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 FAM231AP0DMU4 169 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 FAM231CP0DMU5 169 aa13.67□□□□□ -0.22
PDLIM4-201ENST00000253754 TRPT1Q86TN4 253 aaKnown RBP13.66□□□□□ -0.22
PDLIM4-201ENST00000253754 IGLV4-69A0A075B6H9 119 aa13.66□□□□□ -0.22
PDLIM4-201ENST00000253754 H3BUT2 72 aa13.66□□□□□ -0.22
PDLIM4-201ENST00000253754 OR11H12B2RN74 326 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 K7ERJ3 54 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 RIPPLY3P57055 190 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 OR11H2Q8NH07 326 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 OPRPNQ99935 248 aaPredicted RBP13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 C9orf118A6NHY6 69 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 C11orf86A6NJI1 115 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 CRLF1O75462 422 aa13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 TSSC4Q9Y5U2 329 aaPredicted RBP13.65□□□□□ -0.22
PDLIM4-201ENST00000253754 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
PDLIM4-201ENST00000253754 ODF3L2Q3SX64 289 aa13.64□□□□□ -0.23
PDLIM4-201ENST00000253754 Q9UF83 564 aa13.64□□□□□ -0.23
PDLIM4-201ENST00000253754 K7ERU9 68 aa13.63□□□□□ -0.23
PDLIM4-201ENST00000253754 CCL24O00175 119 aa13.63□□□□□ -0.23
PDLIM4-201ENST00000253754 PMVKQ15126 192 aa13.63□□□□□ -0.23
PDLIM4-201ENST00000253754 FHL3Q13643 280 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 CEND1Q8N111 149 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 LINC01587Q99440 93 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 TIMM17AQ99595 171 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 SPAG8Q99932 426 aaPredicted RBP13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 FBN1P35555 2871 aaKnown RBP13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 MYMXA0A1B0GTQ4 84 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 E9PLD3 99 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 TMEM141Q96I45 108 aa13.62□□□□□ -0.23
PDLIM4-201ENST00000253754 Q6ZSN1 163 aa13.61□□□□□ -0.23
PDLIM4-201ENST00000253754 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
PDLIM4-201ENST00000253754 NHP2Q9NX24 153 aaKnown RBP13.61□□□□□ -0.23
PDLIM4-201ENST00000253754 XCL2Q9UBD3 114 aa13.61□□□□□ -0.23
PDLIM4-201ENST00000253754 I3L3M4 83 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 M0R2P5 195 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 ZNRF2Q8NHG8 242 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 ZNF415Q09FC8 603 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 UFSP1Q6NVU6 142 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 C11orf72Q8NBR9 251 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 TM2D2Q9BX73 214 aa13.6□□□□□ -0.23
PDLIM4-201ENST00000253754 MRPL16Q9NX20 251 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms