RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 XGP55808 180 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 FAM159AQ6UWV7 190 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
COPB1-201ENST00000249923 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 USP24Q9UPU5 2620 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 NXPH4O95158 308 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 CRYGDP07320 174 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 KHDC1LQ5JSQ8 128 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 POM121L12Q8N7R1 296 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 ABCA12Q86UK0 2595 aa7.55□□□□□ -1.2
COPB1-201ENST00000249923 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 OVOL1O14753 267 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 ORMDL2Q53FV1 153 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 TM2D2Q9BX73 214 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 BAALCQ8WXS3 180 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 MSMBP08118 114 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 ANKRD29Q8N6D5 301 aa7.54□□□□□ -1.2
COPB1-201ENST00000249923 DAZ1Q9NQZ3 744 aaKnown RBP7.54□□□□□ -1.2
COPB1-201ENST00000249923 H3BUA1 57 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 TCL1BO95988 128 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 ZNF688P0C7X2 276 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 NFE4Q86UQ8 179 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 TRAV12-1A0A0B4J245 112 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 IGKV3OR2-268A0A0C4DH90 116 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 PSMB8P28062 276 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 ATP5J2P56134 94 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 SMIM20Q8N5G0 67 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 C1QTNF4Q9BXJ3 329 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 IGHV3OR16-12A0A075B7B8 117 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 TSPAN13O95857 204 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 IGHV4-59P01825 116 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 DAND5Q8N907 189 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 ERG28Q9UKR5 140 aa7.53□□□□□ -1.2
COPB1-201ENST00000249923 Q6ZUT4 128 aa7.52□□□□□ -1.21
COPB1-201ENST00000249923 MTORP42345 2549 aa7.52□□□□□ -1.21
COPB1-201ENST00000249923 APCP25054 2843 aa7.52□□□□□ -1.21
COPB1-201ENST00000249923 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
COPB1-201ENST00000249923 SLC25A20O43772 301 aa7.52□□□□□ -1.21
COPB1-201ENST00000249923 MORN3Q6PF18 240 aaPredicted RBP7.52□□□□□ -1.21
COPB1-201ENST00000249923 A0A096LNT2 108 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 A4D1N5 150 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 IGLV4-69A0A075B6H9 119 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 TRAV8-3A0A0A6YYJ7 113 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 MED14OSP0DP75 135 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 MAPK1IP1LQ8NDC0 245 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 COX6B1P14854 86 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 HIVEP2P31629 2446 aa7.51□□□□□ -1.21
COPB1-201ENST00000249923 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 DEFB112Q30KQ8 113 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 SUMO4Q6EEV6 95 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 CEMP1Q6PRD7 247 aaPredicted RBP7.5□□□□□ -1.21
COPB1-201ENST00000249923 MDFICQ9P1T7 246 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 EPG5Q9HCE0 2579 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 IGIPA6NJ69 53 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 POLR2KP53803 58 aaKnown RBP7.5□□□□□ -1.21
COPB1-201ENST00000249923 ZNF876PQ49A33 203 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 VCX2Q9H322 139 aa7.5□□□□□ -1.21
COPB1-201ENST00000249923 TRBV7-9A0A0J9YWB2 115 aa7.49□□□□□ -1.21
COPB1-201ENST00000249923 TEX49A0A1B0GTD5 131 aa7.49□□□□□ -1.21
COPB1-201ENST00000249923 PRO1854Q9UHT4 67 aa7.49□□□□□ -1.21
COPB1-201ENST00000249923 IGHV4OR15-8A0A075B7B6 117 aa7.49□□□□□ -1.21
COPB1-201ENST00000249923 A0A087WW49 117 aa7.49□□□□□ -1.21
COPB1-201ENST00000249923 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
COPB1-201ENST00000249923 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 A8MZ25 164 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 J3QQQ9 107 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 PSMG4Q5JS54 123 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 C2orf82Q6UX34 121 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 DUX3Q96PT4 197 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 ZNF580Q9UK33 172 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 A0A0J9YXV3 536 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 PRM2P04554 102 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
COPB1-201ENST00000249923 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 RBMY1FQ15415 496 aaKnown RBP7.48□□□□□ -1.21
COPB1-201ENST00000249923 Q6ZSV7 163 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 TRAV8-4A0A0B4J246 113 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 IGHV3-16A0A0C4DH30 117 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 K7EMT4 169 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 TEN1Q86WV5 123 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 C9orf85Q96MD7 179 aa7.48□□□□□ -1.21
COPB1-201ENST00000249923 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 CR1P17927 2039 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 A0A0J9YX75 114 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 HIST2H2BDQ6DRA6 164 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 NDUFA11Q86Y39 141 aa7.47□□□□□ -1.21
COPB1-201ENST00000249923 Q8N1Y9 231 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms