RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 C11orf86A6NJI1 115 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 H3BMM0 161 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 CD300EQ496F6 205 aaPredicted RBP12.77□□□□□ -0.37
LRFN3-201ENST00000246529 C4orf3Q8WVX3 66 aa12.77□□□□□ -0.37
LRFN3-201ENST00000246529 CHD6Q8TD26 2715 aa12.76□□□□□ -0.37
LRFN3-201ENST00000246529 PROK1P58294 105 aa12.76□□□□□ -0.37
LRFN3-201ENST00000246529 UFSP1Q6NVU6 142 aa12.76□□□□□ -0.37
LRFN3-201ENST00000246529 OPRPNQ99935 248 aaPredicted RBP12.76□□□□□ -0.37
LRFN3-201ENST00000246529 TM2D2Q9BX73 214 aa12.76□□□□□ -0.37
LRFN3-201ENST00000246529 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
LRFN3-201ENST00000246529 TRGV11A0A075B6L2 103 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 HIST1H4GQ99525 98 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 E9PLD3 99 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 P0DMU3 169 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 FAM231AP0DMU4 169 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 FAM231CP0DMU5 169 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 Q6ZSV7 163 aa12.75□□□□□ -0.37
LRFN3-201ENST00000246529 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
LRFN3-201ENST00000246529 K7EP34 96 aa12.74□□□□□ -0.37
LRFN3-201ENST00000246529 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
LRFN3-201ENST00000246529 DYNLRB2Q8TF09 96 aa12.74□□□□□ -0.37
LRFN3-201ENST00000246529 PEMTQ9UBM1 199 aa12.74□□□□□ -0.37
LRFN3-201ENST00000246529 A0A1W2PRX2 142 aa12.73□□□□□ -0.37
LRFN3-201ENST00000246529 PMVKQ15126 192 aa12.73□□□□□ -0.37
LRFN3-201ENST00000246529 SAMD5Q5TGI4 173 aa12.73□□□□□ -0.37
LRFN3-201ENST00000246529 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
LRFN3-201ENST00000246529 MAP6D1Q9H9H5 199 aa12.73□□□□□ -0.37
LRFN3-201ENST00000246529 FLNAP21333 2647 aaKnown RBP12.73□□□□□ -0.37
LRFN3-201ENST00000246529 GTF2H5Q6ZYL4 71 aa12.72□□□□□ -0.37
LRFN3-201ENST00000246529 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
LRFN3-201ENST00000246529 SPCS1Q9Y6A9 102 aa12.72□□□□□ -0.37
LRFN3-201ENST00000246529 DNAJC9-AS1A6NH13 148 aa12.72□□□□□ -0.37
LRFN3-201ENST00000246529 TMEM141Q96I45 108 aa12.72□□□□□ -0.37
LRFN3-201ENST00000246529 TRBV7-3A0A075B6L6 115 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 ZNF815PA8K554 130 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 TIMM17AQ99595 171 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 Q9UF83 564 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 NIPBLQ6KC79 2804 aaeCLIP12.71□□□□□ -0.37
LRFN3-201ENST00000246529 RNF151Q2KHN1 245 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 DEFB114Q30KQ6 69 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 ESM1Q9NQ30 184 aa12.71□□□□□ -0.37
LRFN3-201ENST00000246529 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
LRFN3-201ENST00000246529 A8MTW9 85 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 FABP2P12104 132 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 SCGB2A2Q13296 93 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 TAL2Q16559 108 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 C12orf74Q32Q52 190 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 TMEM170BQ5T4T1 132 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
LRFN3-201ENST00000246529 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
LRFN3-201ENST00000246529 Q6ZSN1 163 aa12.68□□□□□ -0.38
LRFN3-201ENST00000246529 I3L3M4 83 aa12.68□□□□□ -0.38
LRFN3-201ENST00000246529 SCGB1D4Q6XE38 83 aa12.68□□□□□ -0.38
LRFN3-201ENST00000246529 SPAG8Q99932 426 aaPredicted RBP12.68□□□□□ -0.38
LRFN3-201ENST00000246529 SETD2Q9BYW2 2564 aaPredicted RBP12.68□□□□□ -0.38
LRFN3-201ENST00000246529 C20orf203Q8NBC4 194 aa12.67□□□□□ -0.38
LRFN3-201ENST00000246529 LINC01587Q99440 93 aa12.67□□□□□ -0.38
LRFN3-201ENST00000246529 RHOHQ15669 191 aa12.67□□□□□ -0.38
LRFN3-201ENST00000246529 TRAV2A0A0B4J234 112 aa12.66□□□□□ -0.38
LRFN3-201ENST00000246529 LINC01549A6NIU2 74 aa12.66□□□□□ -0.38
LRFN3-201ENST00000246529 IGLL5B9A064 214 aa12.66□□□□□ -0.38
LRFN3-201ENST00000246529 CD28P10747 220 aa12.66□□□□□ -0.38
LRFN3-201ENST00000246529 M0R2P5 195 aa12.66□□□□□ -0.38
LRFN3-201ENST00000246529 SAP30O75446 220 aa12.66□□□□□ -0.38
LRFN3-201ENST00000246529 TMEM86BQ8N661 226 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 MRPL16Q9NX20 251 aaKnown RBP12.65□□□□□ -0.38
LRFN3-201ENST00000246529 WNK1Q9H4A3 2382 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 HERVK_113P61574 105 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 PAPPA-AS1Q5QFB9 102 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 PDZD2O15018 2839 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 ACANP16112 2415 aa12.65□□□□□ -0.38
LRFN3-201ENST00000246529 ZNF415Q09FC8 603 aa12.64□□□□□ -0.39
LRFN3-201ENST00000246529 ODF3L2Q3SX64 289 aa12.64□□□□□ -0.39
LRFN3-201ENST00000246529 CEMP1Q6PRD7 247 aaPredicted RBP12.64□□□□□ -0.39
LRFN3-201ENST00000246529 C11orf72Q8NBR9 251 aa12.64□□□□□ -0.39
LRFN3-201ENST00000246529 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 VPS25Q9BRG1 176 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 IGHV3-64A0A075B6Q5 118 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 AZU1P20160 251 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 ZNF479Q96JC4 524 aa12.63□□□□□ -0.39
LRFN3-201ENST00000246529 SRSF9Q13242 221 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRFN3-201ENST00000246529 OR5A1Q8NGJ0 315 aa12.62□□□□□ -0.39
LRFN3-201ENST00000246529 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
LRFN3-201ENST00000246529 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
LRFN3-201ENST00000246529 A8MWV9 139 aa12.62□□□□□ -0.39
LRFN3-201ENST00000246529 CCL24O00175 119 aa12.62□□□□□ -0.39
LRFN3-201ENST00000246529 INSP01308 110 aa12.62□□□□□ -0.39
LRFN3-201ENST00000246529 RNASE13Q5GAN3 156 aaKnown RBP12.62□□□□□ -0.39
LRFN3-201ENST00000246529 CITED2Q99967 270 aaPredicted RBP12.62□□□□□ -0.39
LRFN3-201ENST00000246529 A0A0J9YY99 117 aa12.61□□□□□ -0.39
LRFN3-201ENST00000246529 KRTAP1-1Q07627 177 aa12.61□□□□□ -0.39
LRFN3-201ENST00000246529 FAM104AQ969W3 186 aa12.61□□□□□ -0.39
LRFN3-201ENST00000246529 ITPR2Q14571 2701 aa12.6□□□□□ -0.39
LRFN3-201ENST00000246529 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms