RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 H3BQ85 93 aa14.43□□□□□ -0.1
SMPD3-201ENST00000219334 IGF1P05019 195 aa14.43□□□□□ -0.1
SMPD3-201ENST00000219334 SORL1Q92673 2214 aa14.43□□□□□ -0.1
SMPD3-201ENST00000219334 TRAV26-1A0A087WT03 109 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 SMIM9A6NGZ8 99 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 MUSTN1Q8IVN3 82 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 K7EP13 123 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 LINC01548A6NM66 108 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 LGALS9O00182 355 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 CITED1Q99966 193 aa14.42□□□□□ -0.1
SMPD3-201ENST00000219334 MAJINQ3KP22 176 aa14.41□□□□□ -0.1
SMPD3-201ENST00000219334 KIF26AQ9ULI4 1882 aaPredicted RBP14.41□□□□□ -0.1
SMPD3-201ENST00000219334 CTRLP40313 264 aa14.41□□□□□ -0.1
SMPD3-201ENST00000219334 LYRM9A8MSI8 78 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 IGLV2-14P01704 120 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 FAM222AQ5U5X8 452 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 GAGE12HA6NDE8 117 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 GTSF1Q8WW33 167 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 ADAMTS9Q9P2N4 1935 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 KMT2EQ8IZD2 1858 aa14.4□□□□□ -0.1
SMPD3-201ENST00000219334 DEFB114Q30KQ6 69 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 DEFB131BA0A096LNP1 70 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 IGKV2-24A0A0C4DH68 120 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 DIRC1Q969H9 104 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 TOMM6Q96B49 74 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 FSTL3O95633 263 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 LY6G6DO95868 133 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 Q6ZSV7 163 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 HIVEP3Q5T1R4 2406 aa14.39□□□□□ -0.11
SMPD3-201ENST00000219334 A4D1N5 150 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 CHD3Q12873 2000 aaKnown RBP14.38□□□□□ -0.11
SMPD3-201ENST00000219334 TRBV6-1A0A0K0K1D8 114 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 LINC00574Q9H8X3 128 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 NAV2Q8IVL1 2488 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 DAND5Q8N907 189 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 BAALCQ8WXS3 180 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 B9D2Q9BPU9 175 aa14.38□□□□□ -0.11
SMPD3-201ENST00000219334 RS1O15537 224 aa14.37□□□□□ -0.11
SMPD3-201ENST00000219334 NREPQ16612 68 aa14.37□□□□□ -0.11
SMPD3-201ENST00000219334 Q6ZTI0 123 aa14.37□□□□□ -0.11
SMPD3-201ENST00000219334 CCDC168Q8NDH2 2452 aa14.37□□□□□ -0.11
SMPD3-201ENST00000219334 C20orf203Q8NBC4 194 aa14.37□□□□□ -0.11
SMPD3-201ENST00000219334 ODF3Q96PU9 254 aa14.35□□□□□ -0.11
SMPD3-201ENST00000219334 K7EQG2 157 aa14.35□□□□□ -0.11
SMPD3-201ENST00000219334 C22orf34Q6ZV56 151 aa14.35□□□□□ -0.11
SMPD3-201ENST00000219334 HIGD2BQ4VC39 106 aa14.35□□□□□ -0.11
SMPD3-201ENST00000219334 MIR7-3HGQ8N6C7 128 aa14.34□□□□□ -0.11
SMPD3-201ENST00000219334 CRYGDP07320 174 aa14.34□□□□□ -0.11
SMPD3-201ENST00000219334 ACYP1P07311 99 aa14.33□□□□□ -0.11
SMPD3-201ENST00000219334 FREM1Q5H8C1 2179 aa14.33□□□□□ -0.12
SMPD3-201ENST00000219334 CHKB-CPT1BH3BT56 60 aa14.33□□□□□ -0.12
SMPD3-201ENST00000219334 LINC00173Q6ZV60 143 aa14.33□□□□□ -0.12
SMPD3-201ENST00000219334 C11orf86A6NJI1 115 aa14.32□□□□□ -0.12
SMPD3-201ENST00000219334 REG3AQ06141 175 aa14.32□□□□□ -0.12
SMPD3-201ENST00000219334 LINC00269Q8N2A0 174 aa14.32□□□□□ -0.12
SMPD3-201ENST00000219334 ANKRD39Q53RE8 183 aa14.32□□□□□ -0.12
SMPD3-201ENST00000219334 IGKV1D-37A0A075B6S9 117 aa14.32□□□□□ -0.12
SMPD3-201ENST00000219334 FAM110AQ9BQ89 295 aa14.31□□□□□ -0.12
SMPD3-201ENST00000219334 C2orf16Q68DN1 1984 aa14.31□□□□□ -0.12
SMPD3-201ENST00000219334 NCOR2Q9Y618 2525 aa14.31□□□□□ -0.12
SMPD3-201ENST00000219334 IGHV1-58A0A0C4DH39 117 aa14.31□□□□□ -0.12
SMPD3-201ENST00000219334 MIFP14174 115 aa14.31□□□□□ -0.12
SMPD3-201ENST00000219334 MP68P56378 58 aa14.31□□□□□ -0.12
SMPD3-201ENST00000219334 LECT2O14960 151 aa14.3□□□□□ -0.12
SMPD3-201ENST00000219334 C11orf71Q6IPW1 123 aa14.3□□□□□ -0.12
SMPD3-201ENST00000219334 LINC00482Q8N8I6 264 aa14.3□□□□□ -0.12
SMPD3-201ENST00000219334 E9PLD3 99 aa14.3□□□□□ -0.12
SMPD3-201ENST00000219334 UFSP1Q6NVU6 142 aa14.3□□□□□ -0.12
SMPD3-201ENST00000219334 A0A1B0GX51 115 aa14.3□□□□□ -0.12
SMPD3-201ENST00000219334 NAV3Q8IVL0 2385 aa14.29□□□□□ -0.12
SMPD3-201ENST00000219334 Q6ZUT4 128 aa14.29□□□□□ -0.12
SMPD3-201ENST00000219334 TP53TG3Q9ULZ0 132 aa14.29□□□□□ -0.12
SMPD3-201ENST00000219334 JMJD7-PLA2G4BH0Y9G9 81 aa14.28□□□□□ -0.12
SMPD3-201ENST00000219334 EBI3Q14213 229 aa14.28□□□□□ -0.12
SMPD3-201ENST00000219334 PRR14LQ5THK1 2151 aa14.28□□□□□ -0.12
SMPD3-201ENST00000219334 ZFAND2AQ8N6M9 145 aa14.28□□□□□ -0.12
SMPD3-201ENST00000219334 HIGD2AQ9BW72 106 aa14.28□□□□□ -0.12
SMPD3-201ENST00000219334 COA6Q5JTJ3 125 aaKnown RBP14.28□□□□□ -0.12
SMPD3-201ENST00000219334 COX7BP24311 80 aa14.28□□□□□ -0.12
SMPD3-201ENST00000219334 C19orf71A6NCJ1 209 aa14.27□□□□□ -0.13
SMPD3-201ENST00000219334 CEMP1Q6PRD7 247 aaPredicted RBP14.27□□□□□ -0.13
SMPD3-201ENST00000219334 TMEM131Q92545 1883 aa14.27□□□□□ -0.13
SMPD3-201ENST00000219334 P0DMU3 169 aa14.26□□□□□ -0.13
SMPD3-201ENST00000219334 FAM231AP0DMU4 169 aa14.26□□□□□ -0.13
SMPD3-201ENST00000219334 FAM231CP0DMU5 169 aa14.26□□□□□ -0.13
SMPD3-201ENST00000219334 RBM3P98179 157 aaKnown RBP14.26□□□□□ -0.13
SMPD3-201ENST00000219334 ABCA2Q9BZC7 2435 aa14.26□□□□□ -0.13
SMPD3-201ENST00000219334 LRCOL1A6NCL2 159 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 DOPEY1Q5JWR5 2465 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 TRAV10A0A0B4J240 114 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 CHCHD10Q8WYQ3 142 aaPredicted RBP14.25□□□□□ -0.13
SMPD3-201ENST00000219334 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 DSCAMO60469 2012 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 P0C879 139 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 ZNF80P51504 273 aaPredicted RBP14.25□□□□□ -0.13
SMPD3-201ENST00000219334 LINC01620Q4KN68 170 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 PSMG3-AS1Q96PY0 264 aa14.25□□□□□ -0.13
SMPD3-201ENST00000219334 A0A087WZ39 114 aa14.24□□□□□ -0.13
SMPD3-201ENST00000219334 LINC01006Q8NI28 216 aa14.24□□□□□ -0.13
SMPD3-201ENST00000219334 KIR2DL5BQ8NHK3 375 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1535.2 ms