RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 HRCT1Q6UXD1 115 aa7.5□□□□□ -1.21
USP11-201ENST00000218348 LINC00477Q96M19 166 aa7.5□□□□□ -1.21
USP11-201ENST00000218348 C1orf43Q9BWL3 253 aa7.5□□□□□ -1.21
USP11-201ENST00000218348 MAP1LC3AQ9H492 121 aa7.5□□□□□ -1.21
USP11-201ENST00000218348 C9JAW5 83 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 J3QLI3 93 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 MGPP08493 103 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 FXYD2P54710 66 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 CRLF1O75462 422 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 PRM2P04554 102 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 C14orf178Q8N769 122 aaPredicted RBP7.49□□□□□ -1.21
USP11-201ENST00000218348 DNAJC30Q96LL9 226 aa7.49□□□□□ -1.21
USP11-201ENST00000218348 C4orf26Q17RF5 130 aa7.48□□□□□ -1.21
USP11-201ENST00000218348 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
USP11-201ENST00000218348 JPT2Q9H910 190 aa7.48□□□□□ -1.21
USP11-201ENST00000218348 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
USP11-201ENST00000218348 CRIP2P52943 208 aaPredicted RBP7.48□□□□□ -1.21
USP11-201ENST00000218348 C9orf47Q6ZRZ4 202 aa7.48□□□□□ -1.21
USP11-201ENST00000218348 ZFAND2AQ8N6M9 145 aa7.48□□□□□ -1.21
USP11-201ENST00000218348 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
USP11-201ENST00000218348 RHODO00212 210 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 NMUP48645 174 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 CFHR3Q02985 330 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 TMEM101Q96IK0 257 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 ZNF702PQ9H963 129 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 PHLDA3Q9Y5J5 127 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 CACNG7P62955 275 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 ZC2HC1BQ5TFG8 222 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 KIR2DL5BQ8NHK3 375 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 A0A096LNJ9 63 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 LY6G6DO95868 133 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 LEPP41159 167 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 Q6YL49 198 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
USP11-201ENST00000218348 RBAKDNA6NC62 111 aa7.46□□□□□ -1.21
USP11-201ENST00000218348 SOCS3O14543 225 aa7.46□□□□□ -1.21
USP11-201ENST00000218348 FAM74A4Q5TZK3 123 aa7.46□□□□□ -1.21
USP11-201ENST00000218348 ZNF493Q6ZR52 646 aa7.46□□□□□ -1.21
USP11-201ENST00000218348 PCP2Q8IVA1 136 aa7.46□□□□□ -1.21
USP11-201ENST00000218348 TTTY13Q9BZ97 58 aa7.46□□□□□ -1.21
USP11-201ENST00000218348 MUC4Q99102 2169 aa7.46□□□□□ -1.22
USP11-201ENST00000218348 A0A087WWL8 130 aa7.46□□□□□ -1.22
USP11-201ENST00000218348 ZNF747Q9BV97 191 aa7.46□□□□□ -1.22
USP11-201ENST00000218348 KNCNA6PVL3 124 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 SNCGO76070 127 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 KLK9Q2XQG4 91 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 CD7P09564 240 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 RPL39LQ96EH5 51 aaKnown RBP7.45□□□□□ -1.22
USP11-201ENST00000218348 NBEAL2Q6ZNJ1 2754 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 TRAV21A0A0B4J279 112 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 F5H697 171 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 H3BUA1 57 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 OVOL1O14753 267 aa7.45□□□□□ -1.22
USP11-201ENST00000218348 RPL35AP18077 110 aaKnown RBP7.45□□□□□ -1.22
USP11-201ENST00000218348 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
USP11-201ENST00000218348 PRSS1P07477 247 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 DCANP1Q8TF63 244 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 FGF6P10767 208 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 ASIPP42127 132 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 KLHL30-AS1Q8NEE0 82 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 OR9G4Q8NGQ1 327 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 TMEM158Q8WZ71 300 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 PRO0461Q9UI25 63 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 COX8CQ7Z4L0 72 aa7.44□□□□□ -1.22
USP11-201ENST00000218348 RASL10AQ92737 203 aa7.43□□□□□ -1.22
USP11-201ENST00000218348 CARD19Q96LW7 228 aa7.43□□□□□ -1.22
USP11-201ENST00000218348 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
USP11-201ENST00000218348 HBDP02042 147 aa7.43□□□□□ -1.22
USP11-201ENST00000218348 LGALS1P09382 135 aaKnown RBP7.43□□□□□ -1.22
USP11-201ENST00000218348 IGHV3-73A0A0B4J1V6 119 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 IGLL5B9A064 214 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
USP11-201ENST00000218348 DEFB131AP59861 70 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 MRPL53Q96EL3 112 aaKnown RBP7.42□□□□□ -1.22
USP11-201ENST00000218348 LINC01587Q99440 93 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 MDFICQ9P1T7 246 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 FAM236AA0A1B0GUQ0 79 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 FAM236BA0A1B0GV22 79 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 APRG1Q8IVJ8 170 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 FCER1GP30273 86 aa7.42□□□□□ -1.22
USP11-201ENST00000218348 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
USP11-201ENST00000218348 DLX4Q92988 240 aaPredicted RBP7.42□□□□□ -1.22
USP11-201ENST00000218348 J3KT08 172 aa7.41□□□□□ -1.22
USP11-201ENST00000218348 PRADC1Q9BSG0 188 aa7.41□□□□□ -1.22
USP11-201ENST00000218348 U3KQK5 164 aa7.41□□□□□ -1.22
USP11-201ENST00000218348 CRXO43186 299 aaPredicted RBP7.41□□□□□ -1.22
USP11-201ENST00000218348 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
USP11-201ENST00000218348 ESM1Q9NQ30 184 aa7.41□□□□□ -1.22
USP11-201ENST00000218348 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
USP11-201ENST00000218348 IGHV3OR16-12A0A075B7B8 117 aa7.4□□□□□ -1.22
USP11-201ENST00000218348 C10orf126Q8N4M7 172 aa7.4□□□□□ -1.22
USP11-201ENST00000218348 DNAJC9-AS1A6NH13 148 aa7.4□□□□□ -1.22
USP11-201ENST00000218348 E9PLD3 99 aa7.4□□□□□ -1.22
USP11-201ENST00000218348 HERVK_113P63121 156 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms